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Free energies of membrane stalk formation from a lipidomics perspective

Many biological membranes are asymmetric and exhibit complex lipid composition, comprising hundreds of distinct chemical species. Identifying the biological function and advantage of this complexity is a central goal of membrane biology. Here, we study how membrane complexity controls the energetics...

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Autores principales: Poojari, Chetan S., Scherer, Katharina C., Hub, Jochen S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8593120/
https://www.ncbi.nlm.nih.gov/pubmed/34782611
http://dx.doi.org/10.1038/s41467-021-26924-2
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author Poojari, Chetan S.
Scherer, Katharina C.
Hub, Jochen S.
author_facet Poojari, Chetan S.
Scherer, Katharina C.
Hub, Jochen S.
author_sort Poojari, Chetan S.
collection PubMed
description Many biological membranes are asymmetric and exhibit complex lipid composition, comprising hundreds of distinct chemical species. Identifying the biological function and advantage of this complexity is a central goal of membrane biology. Here, we study how membrane complexity controls the energetics of the first steps of membrane fusions, that is, the formation of a stalk. We first present a computationally efficient method for simulating thermodynamically reversible pathways of stalk formation at coarse-grained resolution. The method reveals that the inner leaflet of a typical plasma membrane is far more fusogenic than the outer leaflet, which is likely an adaptation to evolutionary pressure. To rationalize these findings by the distinct lipid compositions, we computed ~200 free energies of stalk formation in membranes with different lipid head groups, tail lengths, tail unsaturations, and sterol content. In summary, the simulations reveal a drastic influence of the lipid composition on stalk formation and a comprehensive fusogenicity map of many biologically relevant lipid classes.
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spelling pubmed-85931202021-11-19 Free energies of membrane stalk formation from a lipidomics perspective Poojari, Chetan S. Scherer, Katharina C. Hub, Jochen S. Nat Commun Article Many biological membranes are asymmetric and exhibit complex lipid composition, comprising hundreds of distinct chemical species. Identifying the biological function and advantage of this complexity is a central goal of membrane biology. Here, we study how membrane complexity controls the energetics of the first steps of membrane fusions, that is, the formation of a stalk. We first present a computationally efficient method for simulating thermodynamically reversible pathways of stalk formation at coarse-grained resolution. The method reveals that the inner leaflet of a typical plasma membrane is far more fusogenic than the outer leaflet, which is likely an adaptation to evolutionary pressure. To rationalize these findings by the distinct lipid compositions, we computed ~200 free energies of stalk formation in membranes with different lipid head groups, tail lengths, tail unsaturations, and sterol content. In summary, the simulations reveal a drastic influence of the lipid composition on stalk formation and a comprehensive fusogenicity map of many biologically relevant lipid classes. Nature Publishing Group UK 2021-11-15 /pmc/articles/PMC8593120/ /pubmed/34782611 http://dx.doi.org/10.1038/s41467-021-26924-2 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Poojari, Chetan S.
Scherer, Katharina C.
Hub, Jochen S.
Free energies of membrane stalk formation from a lipidomics perspective
title Free energies of membrane stalk formation from a lipidomics perspective
title_full Free energies of membrane stalk formation from a lipidomics perspective
title_fullStr Free energies of membrane stalk formation from a lipidomics perspective
title_full_unstemmed Free energies of membrane stalk formation from a lipidomics perspective
title_short Free energies of membrane stalk formation from a lipidomics perspective
title_sort free energies of membrane stalk formation from a lipidomics perspective
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8593120/
https://www.ncbi.nlm.nih.gov/pubmed/34782611
http://dx.doi.org/10.1038/s41467-021-26924-2
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