Cargando…

System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma

Hepatocellular carcinoma (HCC) is an aggressive malignant tumor with a poor prognosis. Reactive oxygen species (ROS) play an important role in tumors; however, the role of ROS-related genes is still unclear in HCC. Therefore, we analyzed the role of ROS-related genes in HCC via bioinformatics method...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Jun Hui, Guan, Yong Jun, Qiu, Zhen Dong, Zhang, Xin, Zi, Liu Liu, Zhou, Yu, Chen, Chen, Yu, Jia, Zhang, Yi Chao, Wang, Wei Xing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8593590/
https://www.ncbi.nlm.nih.gov/pubmed/34795841
http://dx.doi.org/10.1155/2021/6485871
_version_ 1784599777751597056
author Xu, Jun Hui
Guan, Yong Jun
Qiu, Zhen Dong
Zhang, Xin
Zi, Liu Liu
Zhou, Yu
Chen, Chen
Yu, Jia
Zhang, Yi Chao
Wang, Wei Xing
author_facet Xu, Jun Hui
Guan, Yong Jun
Qiu, Zhen Dong
Zhang, Xin
Zi, Liu Liu
Zhou, Yu
Chen, Chen
Yu, Jia
Zhang, Yi Chao
Wang, Wei Xing
author_sort Xu, Jun Hui
collection PubMed
description Hepatocellular carcinoma (HCC) is an aggressive malignant tumor with a poor prognosis. Reactive oxygen species (ROS) play an important role in tumors; however, the role of ROS-related genes is still unclear in HCC. Therefore, we analyzed the role of ROS-related genes in HCC via bioinformatics methods. Firstly, a prognosis model was constructed using LASSO Cox regression and multivariate analyses. We also investigated the potential function of the ROS-related genes and the correlation with immune infiltration, tumor stemness, and drug sensitivity. ICGC database was used for validation. Secondly, we further analyzed the role of 11 ROS-related genes in HCC. As a member of ROS gene family, the role of STK25 has remained unclear in HCC. We explored the biological function of STK25 using in vitro experiments. The present study was the first to construct a ROS-related prognostic model in HCC. The correlation of ROS-related genes with immune infiltration, tumor stemness, and drug sensitivity was dissected. Furthermore, we demonstrated that STK25 knockdown could increase the proliferation, migration, and invasion capacity of HCC cells.
format Online
Article
Text
id pubmed-8593590
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Hindawi
record_format MEDLINE/PubMed
spelling pubmed-85935902021-11-17 System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma Xu, Jun Hui Guan, Yong Jun Qiu, Zhen Dong Zhang, Xin Zi, Liu Liu Zhou, Yu Chen, Chen Yu, Jia Zhang, Yi Chao Wang, Wei Xing Oxid Med Cell Longev Research Article Hepatocellular carcinoma (HCC) is an aggressive malignant tumor with a poor prognosis. Reactive oxygen species (ROS) play an important role in tumors; however, the role of ROS-related genes is still unclear in HCC. Therefore, we analyzed the role of ROS-related genes in HCC via bioinformatics methods. Firstly, a prognosis model was constructed using LASSO Cox regression and multivariate analyses. We also investigated the potential function of the ROS-related genes and the correlation with immune infiltration, tumor stemness, and drug sensitivity. ICGC database was used for validation. Secondly, we further analyzed the role of 11 ROS-related genes in HCC. As a member of ROS gene family, the role of STK25 has remained unclear in HCC. We explored the biological function of STK25 using in vitro experiments. The present study was the first to construct a ROS-related prognostic model in HCC. The correlation of ROS-related genes with immune infiltration, tumor stemness, and drug sensitivity was dissected. Furthermore, we demonstrated that STK25 knockdown could increase the proliferation, migration, and invasion capacity of HCC cells. Hindawi 2021-11-08 /pmc/articles/PMC8593590/ /pubmed/34795841 http://dx.doi.org/10.1155/2021/6485871 Text en Copyright © 2021 Jun Hui Xu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Xu, Jun Hui
Guan, Yong Jun
Qiu, Zhen Dong
Zhang, Xin
Zi, Liu Liu
Zhou, Yu
Chen, Chen
Yu, Jia
Zhang, Yi Chao
Wang, Wei Xing
System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma
title System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma
title_full System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma
title_fullStr System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma
title_full_unstemmed System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma
title_short System Analysis of ROS-Related Genes in the Prognosis, Immune Infiltration, and Drug Sensitivity in Hepatocellular Carcinoma
title_sort system analysis of ros-related genes in the prognosis, immune infiltration, and drug sensitivity in hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8593590/
https://www.ncbi.nlm.nih.gov/pubmed/34795841
http://dx.doi.org/10.1155/2021/6485871
work_keys_str_mv AT xujunhui systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT guanyongjun systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT qiuzhendong systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT zhangxin systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT ziliuliu systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT zhouyu systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT chenchen systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT yujia systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT zhangyichao systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma
AT wangweixing systemanalysisofrosrelatedgenesintheprognosisimmuneinfiltrationanddrugsensitivityinhepatocellularcarcinoma