Documenting elimination of co-circulating COVID-19 clusters using genomics in New South Wales, Australia

OBJECTIVE: To adapt ‘fishplots’ to describe real-time evolution of SARS-CoV-2 genomic clusters. RESULTS: This novel analysis adapted the fishplot to depict the size and duration of circulating genomic clusters over time in New South Wales, Australia. It illuminated the effectiveness of interventions...

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Detalles Bibliográficos
Autores principales: Arnott, Alicia, Draper, Jenny, Rockett, Rebecca J., Lam, Connie, Sadsad, Rosemarie, Gall, Mailie, Martinez, Elena, Byun, Roy, Musto, Jennie, Marais, Ben, Chen, Sharon C.-A., Kok, Jen, Dwyer, Dominic E., Sintchenko, Vitali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Research Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8596089/
https://www.ncbi.nlm.nih.gov/pubmed/34789337
http://dx.doi.org/10.1186/s13104-021-05827-x
Descripción
Sumario:OBJECTIVE: To adapt ‘fishplots’ to describe real-time evolution of SARS-CoV-2 genomic clusters. RESULTS: This novel analysis adapted the fishplot to depict the size and duration of circulating genomic clusters over time in New South Wales, Australia. It illuminated the effectiveness of interventions on the emergence, spread and eventual elimination of clusters and distilled genomic data into clear information to inform public health action. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13104-021-05827-x.

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