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DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle
The mechanism as well the stereochemistry of cascade cycloisomerization of 15–membered triazatriacetylenic macrocycle was investigated theoretically by using M062X/6–31+G(d,p) and M062X/LANL2DZ calculations. The results showed that the mechanism and outcome of the reaction depended on the absence an...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Scientific and Technological Research Council of Turkey
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8596536/ https://www.ncbi.nlm.nih.gov/pubmed/34849071 http://dx.doi.org/10.3906/kim-2012-15 |
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author | MOVAHEDI, Mansooreh ZABARJAD SHIRAZ, Nader EZABADI, Ali SAMADIZADEH, Marjaneh TALEI BAVIL OLYAI, Mohamad Reza |
author_facet | MOVAHEDI, Mansooreh ZABARJAD SHIRAZ, Nader EZABADI, Ali SAMADIZADEH, Marjaneh TALEI BAVIL OLYAI, Mohamad Reza |
author_sort | MOVAHEDI, Mansooreh |
collection | PubMed |
description | The mechanism as well the stereochemistry of cascade cycloisomerization of 15–membered triazatriacetylenic macrocycle was investigated theoretically by using M062X/6–31+G(d,p) and M062X/LANL2DZ calculations. The results showed that the mechanism and outcome of the reaction depended on the absence and presence of a transition metal catalyst. So that, in thermal-induced condition, the reaction had to experience several suprafacial concerted reactions including Ene-reaction (DG(#)=35.38 kcal/mol), Diels–Alder cycloaddition (DG(# )= 17.16 kcal/mol), and sigmatropic H-shift rearrangement (DG(# )= 56.21 kcal/mol) to produce diastereoselective fused cis–tetracyclic aromatic bearing a pyrrole moiety by following kinetic considerations. Also, the [2+2+2] cycloaddition mechanism was neglected in thermal–induced conditions because of high activation free Gibbs energy (DG(# )= 63.90 kcal/mol). In the presence of palladium catalyst, Pd(0) formed an adduct by coordinating to C = C bonds and decreased the DG(#) of the process to 29.58 kcal/mol, and consequently provided a facilitated media for the reaction to follow the [2+2+2] to produce more stable fused tetracyclic benzenoid aromatic by passing through the lower energy barrier. |
format | Online Article Text |
id | pubmed-8596536 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Scientific and Technological Research Council of Turkey |
record_format | MEDLINE/PubMed |
spelling | pubmed-85965362021-11-29 DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle MOVAHEDI, Mansooreh ZABARJAD SHIRAZ, Nader EZABADI, Ali SAMADIZADEH, Marjaneh TALEI BAVIL OLYAI, Mohamad Reza Turk J Chem Article The mechanism as well the stereochemistry of cascade cycloisomerization of 15–membered triazatriacetylenic macrocycle was investigated theoretically by using M062X/6–31+G(d,p) and M062X/LANL2DZ calculations. The results showed that the mechanism and outcome of the reaction depended on the absence and presence of a transition metal catalyst. So that, in thermal-induced condition, the reaction had to experience several suprafacial concerted reactions including Ene-reaction (DG(#)=35.38 kcal/mol), Diels–Alder cycloaddition (DG(# )= 17.16 kcal/mol), and sigmatropic H-shift rearrangement (DG(# )= 56.21 kcal/mol) to produce diastereoselective fused cis–tetracyclic aromatic bearing a pyrrole moiety by following kinetic considerations. Also, the [2+2+2] cycloaddition mechanism was neglected in thermal–induced conditions because of high activation free Gibbs energy (DG(# )= 63.90 kcal/mol). In the presence of palladium catalyst, Pd(0) formed an adduct by coordinating to C = C bonds and decreased the DG(#) of the process to 29.58 kcal/mol, and consequently provided a facilitated media for the reaction to follow the [2+2+2] to produce more stable fused tetracyclic benzenoid aromatic by passing through the lower energy barrier. The Scientific and Technological Research Council of Turkey 2021-10-19 /pmc/articles/PMC8596536/ /pubmed/34849071 http://dx.doi.org/10.3906/kim-2012-15 Text en Copyright © 2021 The Author(s) https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Article MOVAHEDI, Mansooreh ZABARJAD SHIRAZ, Nader EZABADI, Ali SAMADIZADEH, Marjaneh TALEI BAVIL OLYAI, Mohamad Reza DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
title | DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
title_full | DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
title_fullStr | DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
title_full_unstemmed | DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
title_short | DFT (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
title_sort | dft (density functional theory) studies on cycloisomerization of 15–membered triazatriacetylenic macrocycle |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8596536/ https://www.ncbi.nlm.nih.gov/pubmed/34849071 http://dx.doi.org/10.3906/kim-2012-15 |
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