Cargando…

Cell type identification from single-cell transcriptomes in melanoma

BACKGROUND: Single-cell sequencing approaches allow gene expression to be measured at the single-cell level, providing opportunities and challenges to study the aetiology of complex diseases, including cancer. METHODS: Based on single-cell gene and lncRNA expression levels, we proposed a computation...

Descripción completa

Detalles Bibliográficos
Autores principales:	Huo, Qiuyan, Yin, Yu, Liu, Fangfang, Ma, Yuying, Wang, Liming, Qin, Guimin
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2021
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8596920/ https://www.ncbi.nlm.nih.gov/pubmed/34784909 http://dx.doi.org/10.1186/s12920-021-01118-3

Ejemplares similares

Single-Cell Transcriptome Analysis in Melanoma Using Network Embedding
por: Wang, Liming, et al.
Publicado: (2021)

The exploration of disease-specific gene regulatory networks in esophageal carcinoma and stomach adenocarcinoma
por: Qin, Guimin, et al.
Publicado: (2019)

Gene biomarker prediction in glioma by integrating scRNA-seq data and gene regulatory network
por: Qin, Guimin, et al.
Publicado: (2021)

Identification of Transcriptional Heterogeneity and Construction of a Prognostic Model for Melanoma Based on Single-Cell and Bulk Transcriptome Analysis
por: Kang, Zijian, et al.
Publicado: (2022)

High-Dimensional Single-Cell Transcriptomics in Melanoma and Cancer Immunotherapy
por: Quek, Camelia, et al.
Publicado: (2021)

Single-Cell Identification of Melanoma Biomarkers in Circulating Tumor Cells
por: Fankhauser, Reilly, et al.
Publicado: (2022)

Single-cell transcriptome analyses reveal microglia types associated with proliferative retinopathy
por: Liu, Zhiping, et al.
Publicado: (2022)

Targeted Single-cell Isolation of Spontaneously Escaping Live Melanoma Cells for Comparative Transcriptomics
por: Tearle, Jacqueline L.E., et al.
Publicado: (2023)

Blinatumomab-induced T cell activation at single cell transcriptome resolution
por: Huo, Yi, et al.
Publicado: (2021)

Precise identification of cancer cells from allelic imbalances in single cell transcriptomes
por: Trinh, Mi K., et al.
Publicado: (2022)

Identification of Vulnerable Cell Types in Major Brain Disorders Using Single Cell Transcriptomes and Expression Weighted Cell Type Enrichment
por: Skene, Nathan G., et al.
Publicado: (2016)

Identification of HPV oncogene and host cell differentiation associated cellular heterogeneity in cervical cancer via single-cell transcriptomic analysis
por: Li, Yingjie, et al.
Publicado: (2023)

scGWAS: landscape of trait-cell type associations by integrating single-cell transcriptomics-wide and genome-wide association studies
por: Jia, Peilin, et al.
Publicado: (2022)

Single-cell transcriptome analysis reveals the regulatory effects of artesunate on splenic immune cells in polymicrobial sepsis
por: Chen, Jiayun, et al.
Publicado: (2023)

Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data
por: Ianevski, Aleksandr, et al.
Publicado: (2022)

Single cell transcriptomic analysis of human mesenchymal stem cells reveals limited heterogeneity
por: Huang, Yin, et al.
Publicado: (2019)

Automatic cell type identification methods for single-cell RNA sequencing
por: Xie, Bingbing, et al.
Publicado: (2021)

Single-cell transcriptomic, transcriptomic, and metabolomic characterization of human atherosclerosis
por: Liu, Xiaoyang, et al.
Publicado: (2022)

Profiling Temporal Changes of the Pineal Transcriptomes at Single Cell Level Upon Neonatal HIBD
por: Ding, Xin, et al.
Publicado: (2022)

Single Cell Transcriptomics Reconstructs Fate Conversion from Fibroblast to Cardiomyocyte
por: Liu, Ziqing, et al.
Publicado: (2017)

Pseudotime Dynamics in Melanoma Single-Cell Transcriptomes Reveals Different Mechanisms of Tumor Progression
por: Loeffler-Wirth, Henry, et al.
Publicado: (2018)

Single-nucleus and single-cell transcriptomes compared in matched cortical cell types
por: Bakken, Trygve E., et al.
Publicado: (2018)

Cell Type Purification by Single-Cell Transcriptome-Trained Sorting
por: Baron, Chloé S., et al.
Publicado: (2019)

Identification of leukemic and pre-leukemic stem cells by clonal tracking from single-cell transcriptomics
por: Velten, Lars, et al.
Publicado: (2021)

Identification of monocyte-related transcriptomic signature of peripheral blood mononuclear cells in type 1 diabetes
por: Yin, Min, et al.
Publicado: (2022)

Digital Cell Sorter (DCS): a cell type identification, anomaly detection, and Hopfield landscapes toolkit for single-cell transcriptomics
por: Domanskyi, Sergii, et al.
Publicado: (2021)

Single-cell transcriptome in the identification of disease biomarkers: opportunities and challenges
por: Zhu, Zhitu, et al.
Publicado: (2014)

Single-Cell Transcriptome Identifies the Renal Cell Type Tropism of Human BK Polyomavirus
por: Yang, Feng, et al.
Publicado: (2023)

Single-cell transcriptomic landscape of human blood cells
por: Xie, Xiaowei, et al.
Publicado: (2020)

Cell type‐specific transcriptomics of esophageal adenocarcinoma as a scalable alternative for single cell transcriptomics
por: Krämer, Max, et al.
Publicado: (2020)

Identification of Differential Gene Groups From Single-Cell Transcriptomes Using Network Entropy
por: Gan, Yanglan, et al.
Publicado: (2020)

BRIE2: computational identification of splicing phenotypes from single-cell transcriptomic experiments
por: Huang, Yuanhua, et al.
Publicado: (2021)

High-Throughput Single-Cell Transcriptome Profiling of Plant Cell Types
por: Shulse, Christine N., et al.
Publicado: (2019)

Cellcano: supervised cell type identification for single cell ATAC-seq data
por: Ma, Wenjing, et al.
Publicado: (2023)

Identification of Four Biomarkers of Human Skin Aging by Comprehensive Single Cell Transcriptome, Transcriptome, and Proteomics
por: Mao, Rui, et al.
Publicado: (2022)

Integrative single‐cell sequencing analysis distinguishes survival‐associated cells from the breast cancer microenvironment
por: Huang, Ling, et al.
Publicado: (2023)

Dysregulated ligand–receptor interactions from single-cell transcriptomics
por: Liu, Qi, et al.
Publicado: (2022)

Simultaneous profiling of transcriptome and DNA methylome from a single cell
por: Hu, Youjin, et al.
Publicado: (2016)

NonLoss: a novel analytical method for differential biological module identification from single-cell transcriptome
por: Zhao, Hui, et al.
Publicado: (2021)

Identification of Smad3‐related transcriptomes in type‐2 diabetic nephropathy by whole transcriptome RNA sequencing
por: Zhou, Qin, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_pe6ucpup3tqt0jq94md02nd60u