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m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma

Recently, immune response modulation at the epigenetic level is illustrated in studies, but the possible function of RNA 5-methylcytosine (m(5)C) modification in cell infiltration within the tumor microenvironment (TME) is still unclear. Three different m(5)C modification patterns were identified, a...

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Detalles Bibliográficos
Autores principales: Li, Fei, Deng, Qingmei, Pang, Xiaoxi, Huang, Shan, Zhang, Jingmiao, Zhu, Xiaxia, Chen, Hong, Liu, Xiuxia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8597900/
https://www.ncbi.nlm.nih.gov/pubmed/34804923
http://dx.doi.org/10.3389/fonc.2021.729887
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author Li, Fei
Deng, Qingmei
Pang, Xiaoxi
Huang, Shan
Zhang, Jingmiao
Zhu, Xiaxia
Chen, Hong
Liu, Xiuxia
author_facet Li, Fei
Deng, Qingmei
Pang, Xiaoxi
Huang, Shan
Zhang, Jingmiao
Zhu, Xiaxia
Chen, Hong
Liu, Xiuxia
author_sort Li, Fei
collection PubMed
description Recently, immune response modulation at the epigenetic level is illustrated in studies, but the possible function of RNA 5-methylcytosine (m(5)C) modification in cell infiltration within the tumor microenvironment (TME) is still unclear. Three different m(5)C modification patterns were identified, and high differentiation degree was observed in the cell infiltration features within TME under the above three identified patterns. A low m(5)C-score, which was reflected in the activated immunity, predicted the relatively favorable prognostic outcome. A small amount of effective immune infiltration was seen in the high m(5)C-score subtype, indicating the dismal patient survival. Our study constructed a diagnostic model using the 10 signature genes highly related to the m(5)C-score, discovered that the model exhibited high diagnostic accuracy for PTC, and screened out five potential drugs for PTC based on this m5C-score model. m(5)C modification exerts an important part in forming the TME complexity and diversity. It is valuable to evaluate the m(5)C modification patterns in single tumors, so as to enhance our understanding towards the infiltration characterization in TME.
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spelling pubmed-85979002021-11-18 m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma Li, Fei Deng, Qingmei Pang, Xiaoxi Huang, Shan Zhang, Jingmiao Zhu, Xiaxia Chen, Hong Liu, Xiuxia Front Oncol Oncology Recently, immune response modulation at the epigenetic level is illustrated in studies, but the possible function of RNA 5-methylcytosine (m(5)C) modification in cell infiltration within the tumor microenvironment (TME) is still unclear. Three different m(5)C modification patterns were identified, and high differentiation degree was observed in the cell infiltration features within TME under the above three identified patterns. A low m(5)C-score, which was reflected in the activated immunity, predicted the relatively favorable prognostic outcome. A small amount of effective immune infiltration was seen in the high m(5)C-score subtype, indicating the dismal patient survival. Our study constructed a diagnostic model using the 10 signature genes highly related to the m(5)C-score, discovered that the model exhibited high diagnostic accuracy for PTC, and screened out five potential drugs for PTC based on this m5C-score model. m(5)C modification exerts an important part in forming the TME complexity and diversity. It is valuable to evaluate the m(5)C modification patterns in single tumors, so as to enhance our understanding towards the infiltration characterization in TME. Frontiers Media S.A. 2021-11-03 /pmc/articles/PMC8597900/ /pubmed/34804923 http://dx.doi.org/10.3389/fonc.2021.729887 Text en Copyright © 2021 Li, Deng, Pang, Huang, Zhang, Zhu, Chen and Liu https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Li, Fei
Deng, Qingmei
Pang, Xiaoxi
Huang, Shan
Zhang, Jingmiao
Zhu, Xiaxia
Chen, Hong
Liu, Xiuxia
m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma
title m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma
title_full m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma
title_fullStr m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma
title_full_unstemmed m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma
title_short m(5)C Regulator-Mediated Methylation Modification Patterns and Tumor Microenvironment Infiltration Characterization in Papillary Thyroid Carcinoma
title_sort m(5)c regulator-mediated methylation modification patterns and tumor microenvironment infiltration characterization in papillary thyroid carcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8597900/
https://www.ncbi.nlm.nih.gov/pubmed/34804923
http://dx.doi.org/10.3389/fonc.2021.729887
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