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N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives

Nature makes extensive and elaborate use of hydrogen bonding to assemble and stabilize biomolecular structures. The shapes of peptides and proteins rely significantly on N–H⋯O[double bond, length as m-dash]C interactions, which are the linchpins of turns, sheets and helices. The C5 H-bond, in which...

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Autores principales: Mundlapati, Venkateswara Rao, Imani, Zeynab, D'mello, Viola C., Brenner, Valérie, Gloaguen, Eric, Baltaze, Jean-Pierre, Robin, Sylvie, Mons, Michel, Aitken, David J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society of Chemistry 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8597926/
https://www.ncbi.nlm.nih.gov/pubmed/34820098
http://dx.doi.org/10.1039/d1sc05014a
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author Mundlapati, Venkateswara Rao
Imani, Zeynab
D'mello, Viola C.
Brenner, Valérie
Gloaguen, Eric
Baltaze, Jean-Pierre
Robin, Sylvie
Mons, Michel
Aitken, David J.
author_facet Mundlapati, Venkateswara Rao
Imani, Zeynab
D'mello, Viola C.
Brenner, Valérie
Gloaguen, Eric
Baltaze, Jean-Pierre
Robin, Sylvie
Mons, Michel
Aitken, David J.
author_sort Mundlapati, Venkateswara Rao
collection PubMed
description Nature makes extensive and elaborate use of hydrogen bonding to assemble and stabilize biomolecular structures. The shapes of peptides and proteins rely significantly on N–H⋯O[double bond, length as m-dash]C interactions, which are the linchpins of turns, sheets and helices. The C5 H-bond, in which a single residue provides both donor and acceptor, is generally considered too weak to force the backbone to adopt extended structures. Exploiting the synergy between gas phase (experimental and quantum chemistry) and solution spectroscopies to decipher IR spectroscopic data, this work demonstrates that the extended C5-based conformation in 4-membered ring heterocyclic α-amino acid derivatives is significantly stabilized by the formation of an N–H⋯X H-bond. In this synergic system the strength of the C5 interaction remains constant while the N–H⋯X H-bond strength, and thereby the support provided by it, varies with the heteroatom.
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spelling pubmed-85979262021-11-23 N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives Mundlapati, Venkateswara Rao Imani, Zeynab D'mello, Viola C. Brenner, Valérie Gloaguen, Eric Baltaze, Jean-Pierre Robin, Sylvie Mons, Michel Aitken, David J. Chem Sci Chemistry Nature makes extensive and elaborate use of hydrogen bonding to assemble and stabilize biomolecular structures. The shapes of peptides and proteins rely significantly on N–H⋯O[double bond, length as m-dash]C interactions, which are the linchpins of turns, sheets and helices. The C5 H-bond, in which a single residue provides both donor and acceptor, is generally considered too weak to force the backbone to adopt extended structures. Exploiting the synergy between gas phase (experimental and quantum chemistry) and solution spectroscopies to decipher IR spectroscopic data, this work demonstrates that the extended C5-based conformation in 4-membered ring heterocyclic α-amino acid derivatives is significantly stabilized by the formation of an N–H⋯X H-bond. In this synergic system the strength of the C5 interaction remains constant while the N–H⋯X H-bond strength, and thereby the support provided by it, varies with the heteroatom. The Royal Society of Chemistry 2021-10-22 /pmc/articles/PMC8597926/ /pubmed/34820098 http://dx.doi.org/10.1039/d1sc05014a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/
spellingShingle Chemistry
Mundlapati, Venkateswara Rao
Imani, Zeynab
D'mello, Viola C.
Brenner, Valérie
Gloaguen, Eric
Baltaze, Jean-Pierre
Robin, Sylvie
Mons, Michel
Aitken, David J.
N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
title N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
title_full N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
title_fullStr N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
title_full_unstemmed N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
title_short N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
title_sort n–h⋯x interactions stabilize intra-residue c5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8597926/
https://www.ncbi.nlm.nih.gov/pubmed/34820098
http://dx.doi.org/10.1039/d1sc05014a
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