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N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives
Nature makes extensive and elaborate use of hydrogen bonding to assemble and stabilize biomolecular structures. The shapes of peptides and proteins rely significantly on N–H⋯O[double bond, length as m-dash]C interactions, which are the linchpins of turns, sheets and helices. The C5 H-bond, in which...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8597926/ https://www.ncbi.nlm.nih.gov/pubmed/34820098 http://dx.doi.org/10.1039/d1sc05014a |
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author | Mundlapati, Venkateswara Rao Imani, Zeynab D'mello, Viola C. Brenner, Valérie Gloaguen, Eric Baltaze, Jean-Pierre Robin, Sylvie Mons, Michel Aitken, David J. |
author_facet | Mundlapati, Venkateswara Rao Imani, Zeynab D'mello, Viola C. Brenner, Valérie Gloaguen, Eric Baltaze, Jean-Pierre Robin, Sylvie Mons, Michel Aitken, David J. |
author_sort | Mundlapati, Venkateswara Rao |
collection | PubMed |
description | Nature makes extensive and elaborate use of hydrogen bonding to assemble and stabilize biomolecular structures. The shapes of peptides and proteins rely significantly on N–H⋯O[double bond, length as m-dash]C interactions, which are the linchpins of turns, sheets and helices. The C5 H-bond, in which a single residue provides both donor and acceptor, is generally considered too weak to force the backbone to adopt extended structures. Exploiting the synergy between gas phase (experimental and quantum chemistry) and solution spectroscopies to decipher IR spectroscopic data, this work demonstrates that the extended C5-based conformation in 4-membered ring heterocyclic α-amino acid derivatives is significantly stabilized by the formation of an N–H⋯X H-bond. In this synergic system the strength of the C5 interaction remains constant while the N–H⋯X H-bond strength, and thereby the support provided by it, varies with the heteroatom. |
format | Online Article Text |
id | pubmed-8597926 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-85979262021-11-23 N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives Mundlapati, Venkateswara Rao Imani, Zeynab D'mello, Viola C. Brenner, Valérie Gloaguen, Eric Baltaze, Jean-Pierre Robin, Sylvie Mons, Michel Aitken, David J. Chem Sci Chemistry Nature makes extensive and elaborate use of hydrogen bonding to assemble and stabilize biomolecular structures. The shapes of peptides and proteins rely significantly on N–H⋯O[double bond, length as m-dash]C interactions, which are the linchpins of turns, sheets and helices. The C5 H-bond, in which a single residue provides both donor and acceptor, is generally considered too weak to force the backbone to adopt extended structures. Exploiting the synergy between gas phase (experimental and quantum chemistry) and solution spectroscopies to decipher IR spectroscopic data, this work demonstrates that the extended C5-based conformation in 4-membered ring heterocyclic α-amino acid derivatives is significantly stabilized by the formation of an N–H⋯X H-bond. In this synergic system the strength of the C5 interaction remains constant while the N–H⋯X H-bond strength, and thereby the support provided by it, varies with the heteroatom. The Royal Society of Chemistry 2021-10-22 /pmc/articles/PMC8597926/ /pubmed/34820098 http://dx.doi.org/10.1039/d1sc05014a Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by-nc/3.0/ |
spellingShingle | Chemistry Mundlapati, Venkateswara Rao Imani, Zeynab D'mello, Viola C. Brenner, Valérie Gloaguen, Eric Baltaze, Jean-Pierre Robin, Sylvie Mons, Michel Aitken, David J. N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
title | N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
title_full | N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
title_fullStr | N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
title_full_unstemmed | N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
title_short | N–H⋯X interactions stabilize intra-residue C5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
title_sort | n–h⋯x interactions stabilize intra-residue c5 hydrogen bonded conformations in heterocyclic α-amino acid derivatives |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8597926/ https://www.ncbi.nlm.nih.gov/pubmed/34820098 http://dx.doi.org/10.1039/d1sc05014a |
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