Cargando…
Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses
Mitochondrial genomes (mitogenomes) are widely used in research studies on phylogenetic relationships and evolutionary history. Here, we sequenced and analyzed the mitogenome of the scentless plant bug Myrmuslateralis Hsiao, 1964 (Heteroptera, Rhopalidae). The complete 17,309 bp genome encoded 37 ge...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599289/ https://www.ncbi.nlm.nih.gov/pubmed/34819768 http://dx.doi.org/10.3897/zookeys.1070.72742 |
_version_ | 1784600916491501568 |
---|---|
author | Zhao, Wanqing Liu, Dajun Jia, Qian Wu, Xin Zhang, Hufang |
author_facet | Zhao, Wanqing Liu, Dajun Jia, Qian Wu, Xin Zhang, Hufang |
author_sort | Zhao, Wanqing |
collection | PubMed |
description | Mitochondrial genomes (mitogenomes) are widely used in research studies on phylogenetic relationships and evolutionary history. Here, we sequenced and analyzed the mitogenome of the scentless plant bug Myrmuslateralis Hsiao, 1964 (Heteroptera, Rhopalidae). The complete 17,309 bp genome encoded 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a control region. The mitogenome revealed a high A+T content (75.8%), a positive AT-skew (0.092), and a negative GC-skew (–0.165). All 13 PCGs were found to start with ATN codons, except for cox1, in which TTG was the start codon. The Ka/Ks ratios of 13 PCGs were all lower than 1, indicating that purifying selection evolved in these genes. All tRNAs could be folded into the typical cloverleaf secondary structure, except for trnS1 and trnV, which lack dihydrouridine arms. Phylogenetic trees were constructed and analyzed based on the PCG+rRNA from 38 mitogenomes, using maximum likelihood and Bayesian inference methods, showed that M.lateralis and Chorosomamacilentum Stål, 1858 grouped together in the tribe Chorosomatini. In addition, Coreoidea and Pyrrhocoroidea were sister groups among the superfamilies of Trichophora, and Rhopalidae was a sister group to Alydidae + Coreidae. |
format | Online Article Text |
id | pubmed-8599289 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-85992892021-11-23 Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses Zhao, Wanqing Liu, Dajun Jia, Qian Wu, Xin Zhang, Hufang Zookeys Research Article Mitochondrial genomes (mitogenomes) are widely used in research studies on phylogenetic relationships and evolutionary history. Here, we sequenced and analyzed the mitogenome of the scentless plant bug Myrmuslateralis Hsiao, 1964 (Heteroptera, Rhopalidae). The complete 17,309 bp genome encoded 37 genes, including 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and a control region. The mitogenome revealed a high A+T content (75.8%), a positive AT-skew (0.092), and a negative GC-skew (–0.165). All 13 PCGs were found to start with ATN codons, except for cox1, in which TTG was the start codon. The Ka/Ks ratios of 13 PCGs were all lower than 1, indicating that purifying selection evolved in these genes. All tRNAs could be folded into the typical cloverleaf secondary structure, except for trnS1 and trnV, which lack dihydrouridine arms. Phylogenetic trees were constructed and analyzed based on the PCG+rRNA from 38 mitogenomes, using maximum likelihood and Bayesian inference methods, showed that M.lateralis and Chorosomamacilentum Stål, 1858 grouped together in the tribe Chorosomatini. In addition, Coreoidea and Pyrrhocoroidea were sister groups among the superfamilies of Trichophora, and Rhopalidae was a sister group to Alydidae + Coreidae. Pensoft Publishers 2021-11-10 /pmc/articles/PMC8599289/ /pubmed/34819768 http://dx.doi.org/10.3897/zookeys.1070.72742 Text en Wanqing Zhao, Dajun Liu, Qian Jia, Xin Wu, Hufang Zhang https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Zhao, Wanqing Liu, Dajun Jia, Qian Wu, Xin Zhang, Hufang Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses |
title | Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses |
title_full | Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses |
title_fullStr | Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses |
title_full_unstemmed | Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses |
title_short | Characterization of the complete mitochondrial genome of Myrmuslateralis (Heteroptera, Rhopalidae) and its implication for phylogenetic analyses |
title_sort | characterization of the complete mitochondrial genome of myrmuslateralis (heteroptera, rhopalidae) and its implication for phylogenetic analyses |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599289/ https://www.ncbi.nlm.nih.gov/pubmed/34819768 http://dx.doi.org/10.3897/zookeys.1070.72742 |
work_keys_str_mv | AT zhaowanqing characterizationofthecompletemitochondrialgenomeofmyrmuslateralisheteropterarhopalidaeanditsimplicationforphylogeneticanalyses AT liudajun characterizationofthecompletemitochondrialgenomeofmyrmuslateralisheteropterarhopalidaeanditsimplicationforphylogeneticanalyses AT jiaqian characterizationofthecompletemitochondrialgenomeofmyrmuslateralisheteropterarhopalidaeanditsimplicationforphylogeneticanalyses AT wuxin characterizationofthecompletemitochondrialgenomeofmyrmuslateralisheteropterarhopalidaeanditsimplicationforphylogeneticanalyses AT zhanghufang characterizationofthecompletemitochondrialgenomeofmyrmuslateralisheteropterarhopalidaeanditsimplicationforphylogeneticanalyses |