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Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system

Angustmycin A has anti-mycobacterial and cytokinin activities, and contains an intriguing structure in which an unusual sugar with C5′-C6′ dehydration is linked to adenine via an N-glycosidic bond. However, the logic underlying the biosynthesis of this molecule has long remained obscure. Here, we ad...

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Autores principales: Yu, Le, Zhou, Wenting, She, Yixuan, Ma, Hongmin, Cai, You-Sheng, Jiang, Ming, Deng, Zixin, Price, Neil P. J., Chen, Wenqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599513/
https://www.ncbi.nlm.nih.gov/pubmed/34789759
http://dx.doi.org/10.1038/s41467-021-26928-y
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author Yu, Le
Zhou, Wenting
She, Yixuan
Ma, Hongmin
Cai, You-Sheng
Jiang, Ming
Deng, Zixin
Price, Neil P. J.
Chen, Wenqing
author_facet Yu, Le
Zhou, Wenting
She, Yixuan
Ma, Hongmin
Cai, You-Sheng
Jiang, Ming
Deng, Zixin
Price, Neil P. J.
Chen, Wenqing
author_sort Yu, Le
collection PubMed
description Angustmycin A has anti-mycobacterial and cytokinin activities, and contains an intriguing structure in which an unusual sugar with C5′-C6′ dehydration is linked to adenine via an N-glycosidic bond. However, the logic underlying the biosynthesis of this molecule has long remained obscure. Here, we address angustmycin A biosynthesis by the full deciphering of its pathway. We demonstrate that AgmD, C, A, E, and B function as d-allulose 6-phosphate 3-epimerase, d-allulose 6-phosphate pyrophosphokinase, adenine phosphoallulosyltransferase, phosphoribohydrolase, and phosphatase, respectively, and that these collaboratively catalyze the relay reactions to biosynthesize angustmycin C. Additionally, we provide evidence that AgmF is a noncanonical dehydratase for the final step to angustmycin A via a self-sufficient strategy for cofactor recycling. Finally, we have reconstituted the entire six-enzyme pathway in vitro and in E. coli leading to angustmycin A production. These results expand the enzymatic repertoire regarding natural product biosynthesis, and also open the way for rational and rapid discovery of other angustmycin related antibiotics.
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spelling pubmed-85995132021-11-19 Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system Yu, Le Zhou, Wenting She, Yixuan Ma, Hongmin Cai, You-Sheng Jiang, Ming Deng, Zixin Price, Neil P. J. Chen, Wenqing Nat Commun Article Angustmycin A has anti-mycobacterial and cytokinin activities, and contains an intriguing structure in which an unusual sugar with C5′-C6′ dehydration is linked to adenine via an N-glycosidic bond. However, the logic underlying the biosynthesis of this molecule has long remained obscure. Here, we address angustmycin A biosynthesis by the full deciphering of its pathway. We demonstrate that AgmD, C, A, E, and B function as d-allulose 6-phosphate 3-epimerase, d-allulose 6-phosphate pyrophosphokinase, adenine phosphoallulosyltransferase, phosphoribohydrolase, and phosphatase, respectively, and that these collaboratively catalyze the relay reactions to biosynthesize angustmycin C. Additionally, we provide evidence that AgmF is a noncanonical dehydratase for the final step to angustmycin A via a self-sufficient strategy for cofactor recycling. Finally, we have reconstituted the entire six-enzyme pathway in vitro and in E. coli leading to angustmycin A production. These results expand the enzymatic repertoire regarding natural product biosynthesis, and also open the way for rational and rapid discovery of other angustmycin related antibiotics. Nature Publishing Group UK 2021-11-17 /pmc/articles/PMC8599513/ /pubmed/34789759 http://dx.doi.org/10.1038/s41467-021-26928-y Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Yu, Le
Zhou, Wenting
She, Yixuan
Ma, Hongmin
Cai, You-Sheng
Jiang, Ming
Deng, Zixin
Price, Neil P. J.
Chen, Wenqing
Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system
title Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system
title_full Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system
title_fullStr Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system
title_full_unstemmed Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system
title_short Efficient biosynthesis of nucleoside cytokinin angustmycin A containing an unusual sugar system
title_sort efficient biosynthesis of nucleoside cytokinin angustmycin a containing an unusual sugar system
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599513/
https://www.ncbi.nlm.nih.gov/pubmed/34789759
http://dx.doi.org/10.1038/s41467-021-26928-y
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