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Epigenetic clock and methylation studies in cats

Human DNA methylation profiles have been used successfully to develop highly accurate biomarkers of aging (“epigenetic clocks”). Although these human epigenetic clocks are not immediately applicable to all species of the animal kingdom, the principles underpinning them appear to be conserved even in...

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Autores principales: Raj, Ken, Szladovits, Balazs, Haghani, Amin, Zoller, Joseph A., Li, Caesar Z., Black, Pete, Maddox, Dewey, Robeck, Todd R., Horvath, Steve
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599556/
https://www.ncbi.nlm.nih.gov/pubmed/34463900
http://dx.doi.org/10.1007/s11357-021-00445-8
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author Raj, Ken
Szladovits, Balazs
Haghani, Amin
Zoller, Joseph A.
Li, Caesar Z.
Black, Pete
Maddox, Dewey
Robeck, Todd R.
Horvath, Steve
author_facet Raj, Ken
Szladovits, Balazs
Haghani, Amin
Zoller, Joseph A.
Li, Caesar Z.
Black, Pete
Maddox, Dewey
Robeck, Todd R.
Horvath, Steve
author_sort Raj, Ken
collection PubMed
description Human DNA methylation profiles have been used successfully to develop highly accurate biomarkers of aging (“epigenetic clocks”). Although these human epigenetic clocks are not immediately applicable to all species of the animal kingdom, the principles underpinning them appear to be conserved even in animals that are evolutionarily far removed from humans. This is exemplified by recent development of epigenetic clocks for mice and other mammalian species. Here, we describe epigenetic clocks for the domestic cat (Felis catus), based on methylation profiles of CpGs with flanking DNA sequences that are highly conserved between multiple mammalian species. Methylation levels of these CpGs are measured using a custom-designed Infinium array (HorvathMammalMethylChip40). From these, we present 3 epigenetic clocks for cats; of which, one applies only to blood samples from cats, while the remaining two dual-species human-cat clocks apply both to cats and humans. We demonstrate that these domestic cat clocks also lead to high age correlations in cheetahs, tigers, and lions. It is expected that these epigenetic clocks for cats possess the potential to be further developed for monitoring feline health as well as being used for identifying and validating anti-aging interventions. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11357-021-00445-8.
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spelling pubmed-85995562021-12-02 Epigenetic clock and methylation studies in cats Raj, Ken Szladovits, Balazs Haghani, Amin Zoller, Joseph A. Li, Caesar Z. Black, Pete Maddox, Dewey Robeck, Todd R. Horvath, Steve GeroScience Original Article Human DNA methylation profiles have been used successfully to develop highly accurate biomarkers of aging (“epigenetic clocks”). Although these human epigenetic clocks are not immediately applicable to all species of the animal kingdom, the principles underpinning them appear to be conserved even in animals that are evolutionarily far removed from humans. This is exemplified by recent development of epigenetic clocks for mice and other mammalian species. Here, we describe epigenetic clocks for the domestic cat (Felis catus), based on methylation profiles of CpGs with flanking DNA sequences that are highly conserved between multiple mammalian species. Methylation levels of these CpGs are measured using a custom-designed Infinium array (HorvathMammalMethylChip40). From these, we present 3 epigenetic clocks for cats; of which, one applies only to blood samples from cats, while the remaining two dual-species human-cat clocks apply both to cats and humans. We demonstrate that these domestic cat clocks also lead to high age correlations in cheetahs, tigers, and lions. It is expected that these epigenetic clocks for cats possess the potential to be further developed for monitoring feline health as well as being used for identifying and validating anti-aging interventions. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11357-021-00445-8. Springer International Publishing 2021-08-31 /pmc/articles/PMC8599556/ /pubmed/34463900 http://dx.doi.org/10.1007/s11357-021-00445-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Raj, Ken
Szladovits, Balazs
Haghani, Amin
Zoller, Joseph A.
Li, Caesar Z.
Black, Pete
Maddox, Dewey
Robeck, Todd R.
Horvath, Steve
Epigenetic clock and methylation studies in cats
title Epigenetic clock and methylation studies in cats
title_full Epigenetic clock and methylation studies in cats
title_fullStr Epigenetic clock and methylation studies in cats
title_full_unstemmed Epigenetic clock and methylation studies in cats
title_short Epigenetic clock and methylation studies in cats
title_sort epigenetic clock and methylation studies in cats
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8599556/
https://www.ncbi.nlm.nih.gov/pubmed/34463900
http://dx.doi.org/10.1007/s11357-021-00445-8
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