Cargando…

Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease

Gaucher disease is renowned for extreme phenotypic diversity that does not show consistent genotype/phenotype correlations. In Argentina, a national collaborative group, Grupo Argentino de Diagnóstico y Tratamiento de la Enfermedad de Gaucher, GADTEG, delineated uniformly severe type 1 Gaucher disea...

Descripción completa

Detalles Bibliográficos
Autores principales: Drelichman, Guillermo I., Fernández Escobar, Nicolas, Soberon, Barbara C., Basack, Nora F., Frabasil, Joaquin, Schenone, Andrea B., Aguilar, Gabriel, Larroudé, Maria S., Knight, James R., Zhao, Dejian, Ruan, Jiapeng, Mistry, Pramod K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8600149/
https://www.ncbi.nlm.nih.gov/pubmed/34820281
http://dx.doi.org/10.1016/j.ymgmr.2021.100820
_version_ 1784601089583087616
author Drelichman, Guillermo I.
Fernández Escobar, Nicolas
Soberon, Barbara C.
Basack, Nora F.
Frabasil, Joaquin
Schenone, Andrea B.
Aguilar, Gabriel
Larroudé, Maria S.
Knight, James R.
Zhao, Dejian
Ruan, Jiapeng
Mistry, Pramod K.
author_facet Drelichman, Guillermo I.
Fernández Escobar, Nicolas
Soberon, Barbara C.
Basack, Nora F.
Frabasil, Joaquin
Schenone, Andrea B.
Aguilar, Gabriel
Larroudé, Maria S.
Knight, James R.
Zhao, Dejian
Ruan, Jiapeng
Mistry, Pramod K.
author_sort Drelichman, Guillermo I.
collection PubMed
description Gaucher disease is renowned for extreme phenotypic diversity that does not show consistent genotype/phenotype correlations. In Argentina, a national collaborative group, Grupo Argentino de Diagnóstico y Tratamiento de la Enfermedad de Gaucher, GADTEG, delineated uniformly severe type 1 Gaucher disease manifestations presenting in childhood with large burden of irreversible skeletal disease. Here using Long-Read Single Molecule Real-Time (SMRT) Sequencing of GBA1 locus, we show that the RecNciI allele is highly prevalent and it is associated with severe skeletal manifestations with onset in childhood or in young adults. Additionally, we described novel GBA1 variants not previously described.
format Online
Article
Text
id pubmed-8600149
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-86001492021-11-23 Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease Drelichman, Guillermo I. Fernández Escobar, Nicolas Soberon, Barbara C. Basack, Nora F. Frabasil, Joaquin Schenone, Andrea B. Aguilar, Gabriel Larroudé, Maria S. Knight, James R. Zhao, Dejian Ruan, Jiapeng Mistry, Pramod K. Mol Genet Metab Rep Research Paper Gaucher disease is renowned for extreme phenotypic diversity that does not show consistent genotype/phenotype correlations. In Argentina, a national collaborative group, Grupo Argentino de Diagnóstico y Tratamiento de la Enfermedad de Gaucher, GADTEG, delineated uniformly severe type 1 Gaucher disease manifestations presenting in childhood with large burden of irreversible skeletal disease. Here using Long-Read Single Molecule Real-Time (SMRT) Sequencing of GBA1 locus, we show that the RecNciI allele is highly prevalent and it is associated with severe skeletal manifestations with onset in childhood or in young adults. Additionally, we described novel GBA1 variants not previously described. Elsevier 2021-11-11 /pmc/articles/PMC8600149/ /pubmed/34820281 http://dx.doi.org/10.1016/j.ymgmr.2021.100820 Text en © 2021 Published by Elsevier Inc. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Paper
Drelichman, Guillermo I.
Fernández Escobar, Nicolas
Soberon, Barbara C.
Basack, Nora F.
Frabasil, Joaquin
Schenone, Andrea B.
Aguilar, Gabriel
Larroudé, Maria S.
Knight, James R.
Zhao, Dejian
Ruan, Jiapeng
Mistry, Pramod K.
Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease
title Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease
title_full Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease
title_fullStr Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease
title_full_unstemmed Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease
title_short Long-read single molecule real-time (SMRT) sequencing of GBA1 locus in Gaucher disease national cohort from Argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: Collaborative study from the Argentine Group for Diagnosis and Treatment of Gaucher Disease
title_sort long-read single molecule real-time (smrt) sequencing of gba1 locus in gaucher disease national cohort from argentina reveals high frequency of complex allele underlying severe skeletal phenotypes: collaborative study from the argentine group for diagnosis and treatment of gaucher disease
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8600149/
https://www.ncbi.nlm.nih.gov/pubmed/34820281
http://dx.doi.org/10.1016/j.ymgmr.2021.100820
work_keys_str_mv AT drelichmanguillermoi longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT fernandezescobarnicolas longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT soberonbarbarac longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT basacknoraf longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT frabasiljoaquin longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT schenoneandreab longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT aguilargabriel longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT larroudemarias longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT knightjamesr longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT zhaodejian longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT ruanjiapeng longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT mistrypramodk longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease
AT longreadsinglemoleculerealtimesmrtsequencingofgba1locusingaucherdiseasenationalcohortfromargentinarevealshighfrequencyofcomplexalleleunderlyingsevereskeletalphenotypescollaborativestudyfromtheargentinegroupfordiagnosisandtreatmentofgaucherdisease