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Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H

Lignin‐based aromatics are attractive raw materials to derive medium‐chain length poly(3‐hydroxyalkanoates) (mcl‐PHAs), biodegradable polymers of commercial value. So far, this conversion has exclusively used the ortho‐cleavage route of Pseudomonas putida KT2440, which results in the secretion of to...

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Autores principales: Borrero‐de Acuña, José Manuel, Gutierrez‐Urrutia, Izabook, Hidalgo‐Dumont, Cristian, Aravena‐Carrasco, Carla, Orellana‐Saez, Matias, Palominos‐Gonzalez, Nestor, van Duuren, Jozef B. J. H., Wagner, Viktoria, Gläser, Lars, Becker, Judith, Kohlstedt, Michael, Zacconi, Flavia C., Wittmann, Christoph, Poblete‐Castro, Ignacio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2020
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8601166/
https://www.ncbi.nlm.nih.gov/pubmed/33171015
http://dx.doi.org/10.1111/1751-7915.13705
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author Borrero‐de Acuña, José Manuel
Gutierrez‐Urrutia, Izabook
Hidalgo‐Dumont, Cristian
Aravena‐Carrasco, Carla
Orellana‐Saez, Matias
Palominos‐Gonzalez, Nestor
van Duuren, Jozef B. J. H.
Wagner, Viktoria
Gläser, Lars
Becker, Judith
Kohlstedt, Michael
Zacconi, Flavia C.
Wittmann, Christoph
Poblete‐Castro, Ignacio
author_facet Borrero‐de Acuña, José Manuel
Gutierrez‐Urrutia, Izabook
Hidalgo‐Dumont, Cristian
Aravena‐Carrasco, Carla
Orellana‐Saez, Matias
Palominos‐Gonzalez, Nestor
van Duuren, Jozef B. J. H.
Wagner, Viktoria
Gläser, Lars
Becker, Judith
Kohlstedt, Michael
Zacconi, Flavia C.
Wittmann, Christoph
Poblete‐Castro, Ignacio
author_sort Borrero‐de Acuña, José Manuel
collection PubMed
description Lignin‐based aromatics are attractive raw materials to derive medium‐chain length poly(3‐hydroxyalkanoates) (mcl‐PHAs), biodegradable polymers of commercial value. So far, this conversion has exclusively used the ortho‐cleavage route of Pseudomonas putida KT2440, which results in the secretion of toxic intermediates and limited performance. Pseudomonas putida H exhibits the ortho‐ and the meta‐cleavage pathways where the latter appears promising because it stoichiometrically yields higher levels of acetyl‐CoA. Here, we created a double‐mutant H‐ΔcatAΔA2 that utilizes the meta route exclusively and synthesized 30% more PHA on benzoate than the parental strain but suffered from catechol accumulation. The single deletion of the catA2 gene in the H strain provoked a slight attenuation on the enzymatic capacity of the ortho route (25%) and activation of the meta route by nearly 8‐fold, producing twice as much mcl‐PHAs compared to the wild type. Inline, the mutant H‐ΔcatA2 showed a 2‐fold increase in the intracellular malonyl‐CoA abundance – the main precursor for mcl‐PHAs synthesis. As inferred from flux simulation and enzyme activity assays, the superior performance of H‐ΔcatA2 benefited from reduced flux through the TCA cycle and malic enzyme and diminished by‐product formation. In a benzoate‐based fed‐batch, P. putida H‐ΔcatA2 achieved a PHA titre of 6.1 g l(–1) and a volumetric productivity of 1.8 g l(–1) day(–1). Using Kraft lignin hydrolysate as feedstock, the engineered strain formed 1.4 g l(‐ 1) PHA. The balancing of carbon flux between the parallel catechol‐degrading routes emerges as an important strategy to prevent intermediate accumulation and elevate mcl‐PHA production in P. putida H and, as shown here, sets the next level to derive this sustainable biopolymer from lignin hydrolysates and aromatics.
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spelling pubmed-86011662021-11-24 Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H Borrero‐de Acuña, José Manuel Gutierrez‐Urrutia, Izabook Hidalgo‐Dumont, Cristian Aravena‐Carrasco, Carla Orellana‐Saez, Matias Palominos‐Gonzalez, Nestor van Duuren, Jozef B. J. H. Wagner, Viktoria Gläser, Lars Becker, Judith Kohlstedt, Michael Zacconi, Flavia C. Wittmann, Christoph Poblete‐Castro, Ignacio Microb Biotechnol Research Articles Lignin‐based aromatics are attractive raw materials to derive medium‐chain length poly(3‐hydroxyalkanoates) (mcl‐PHAs), biodegradable polymers of commercial value. So far, this conversion has exclusively used the ortho‐cleavage route of Pseudomonas putida KT2440, which results in the secretion of toxic intermediates and limited performance. Pseudomonas putida H exhibits the ortho‐ and the meta‐cleavage pathways where the latter appears promising because it stoichiometrically yields higher levels of acetyl‐CoA. Here, we created a double‐mutant H‐ΔcatAΔA2 that utilizes the meta route exclusively and synthesized 30% more PHA on benzoate than the parental strain but suffered from catechol accumulation. The single deletion of the catA2 gene in the H strain provoked a slight attenuation on the enzymatic capacity of the ortho route (25%) and activation of the meta route by nearly 8‐fold, producing twice as much mcl‐PHAs compared to the wild type. Inline, the mutant H‐ΔcatA2 showed a 2‐fold increase in the intracellular malonyl‐CoA abundance – the main precursor for mcl‐PHAs synthesis. As inferred from flux simulation and enzyme activity assays, the superior performance of H‐ΔcatA2 benefited from reduced flux through the TCA cycle and malic enzyme and diminished by‐product formation. In a benzoate‐based fed‐batch, P. putida H‐ΔcatA2 achieved a PHA titre of 6.1 g l(–1) and a volumetric productivity of 1.8 g l(–1) day(–1). Using Kraft lignin hydrolysate as feedstock, the engineered strain formed 1.4 g l(‐ 1) PHA. The balancing of carbon flux between the parallel catechol‐degrading routes emerges as an important strategy to prevent intermediate accumulation and elevate mcl‐PHA production in P. putida H and, as shown here, sets the next level to derive this sustainable biopolymer from lignin hydrolysates and aromatics. John Wiley and Sons Inc. 2020-11-10 /pmc/articles/PMC8601166/ /pubmed/33171015 http://dx.doi.org/10.1111/1751-7915.13705 Text en © 2020 The Authors. Microbial Biotechnology published by Society for Applied Microbiology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Borrero‐de Acuña, José Manuel
Gutierrez‐Urrutia, Izabook
Hidalgo‐Dumont, Cristian
Aravena‐Carrasco, Carla
Orellana‐Saez, Matias
Palominos‐Gonzalez, Nestor
van Duuren, Jozef B. J. H.
Wagner, Viktoria
Gläser, Lars
Becker, Judith
Kohlstedt, Michael
Zacconi, Flavia C.
Wittmann, Christoph
Poblete‐Castro, Ignacio
Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H
title Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H
title_full Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H
title_fullStr Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H
title_full_unstemmed Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H
title_short Channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in Pseudomonas putida H
title_sort channelling carbon flux through the meta‐cleavage route for improved poly(3‐hydroxyalkanoate) production from benzoate and lignin‐based aromatics in pseudomonas putida h
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8601166/
https://www.ncbi.nlm.nih.gov/pubmed/33171015
http://dx.doi.org/10.1111/1751-7915.13705
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