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The world of ribonucleases from pseudomonads: a short trip through the main features and singularities

The development of synthetic biology has brought an unprecedented increase in the number molecular tools applicable into a microbial chassis. The exploration of such tools into different bacteria revealed not only the challenges of context dependency of biological functions but also the complexity a...

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Autores principales: Apura, Patrícia, Gonçalves, Luis G., Viegas, Sandra C., Arraiano, Cecília M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8601179/
https://www.ncbi.nlm.nih.gov/pubmed/34427985
http://dx.doi.org/10.1111/1751-7915.13890
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author Apura, Patrícia
Gonçalves, Luis G.
Viegas, Sandra C.
Arraiano, Cecília M.
author_facet Apura, Patrícia
Gonçalves, Luis G.
Viegas, Sandra C.
Arraiano, Cecília M.
author_sort Apura, Patrícia
collection PubMed
description The development of synthetic biology has brought an unprecedented increase in the number molecular tools applicable into a microbial chassis. The exploration of such tools into different bacteria revealed not only the challenges of context dependency of biological functions but also the complexity and diversity of regulatory layers in bacterial cells. Most of the standardized genetic tools and principles/functions have been mostly based on model microorganisms, namely Escherichia coli. In contrast, the non‐model pseudomonads lack a deeper understanding of their regulatory layers and have limited molecular tools. They are resistant pathogens and promising alternative bacterial chassis, making them attractive targets for further studies. Ribonucleases (RNases) are key players in the post‐transcriptional control of gene expression by degrading or processing the RNA molecules in the cell. These enzymes act according to the cellular requirements and can also be seen as the recyclers of ribonucleotides, allowing a continuous input of these cellular resources. This makes these post‐transcriptional regulators perfect candidates to regulate microbial physiology. This review summarizes the current knowledge and unique properties of ribonucleases in the world of pseudomonads, taking into account genomic context analysis, biological function and strategies to use ribonucleases to improve biotechnological processes.
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spelling pubmed-86011792021-11-24 The world of ribonucleases from pseudomonads: a short trip through the main features and singularities Apura, Patrícia Gonçalves, Luis G. Viegas, Sandra C. Arraiano, Cecília M. Microb Biotechnol Special Issue Article The development of synthetic biology has brought an unprecedented increase in the number molecular tools applicable into a microbial chassis. The exploration of such tools into different bacteria revealed not only the challenges of context dependency of biological functions but also the complexity and diversity of regulatory layers in bacterial cells. Most of the standardized genetic tools and principles/functions have been mostly based on model microorganisms, namely Escherichia coli. In contrast, the non‐model pseudomonads lack a deeper understanding of their regulatory layers and have limited molecular tools. They are resistant pathogens and promising alternative bacterial chassis, making them attractive targets for further studies. Ribonucleases (RNases) are key players in the post‐transcriptional control of gene expression by degrading or processing the RNA molecules in the cell. These enzymes act according to the cellular requirements and can also be seen as the recyclers of ribonucleotides, allowing a continuous input of these cellular resources. This makes these post‐transcriptional regulators perfect candidates to regulate microbial physiology. This review summarizes the current knowledge and unique properties of ribonucleases in the world of pseudomonads, taking into account genomic context analysis, biological function and strategies to use ribonucleases to improve biotechnological processes. John Wiley and Sons Inc. 2021-08-24 /pmc/articles/PMC8601179/ /pubmed/34427985 http://dx.doi.org/10.1111/1751-7915.13890 Text en © 2021 The Authors. Microbial Biotechnology published by Society for Applied Microbiology and John Wiley & Sons Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Special Issue Article
Apura, Patrícia
Gonçalves, Luis G.
Viegas, Sandra C.
Arraiano, Cecília M.
The world of ribonucleases from pseudomonads: a short trip through the main features and singularities
title The world of ribonucleases from pseudomonads: a short trip through the main features and singularities
title_full The world of ribonucleases from pseudomonads: a short trip through the main features and singularities
title_fullStr The world of ribonucleases from pseudomonads: a short trip through the main features and singularities
title_full_unstemmed The world of ribonucleases from pseudomonads: a short trip through the main features and singularities
title_short The world of ribonucleases from pseudomonads: a short trip through the main features and singularities
title_sort world of ribonucleases from pseudomonads: a short trip through the main features and singularities
topic Special Issue Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8601179/
https://www.ncbi.nlm.nih.gov/pubmed/34427985
http://dx.doi.org/10.1111/1751-7915.13890
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