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A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied
Scorpion venoms are mixtures of proteins, peptides and small molecular compounds with high specificity for ion channels and are therefore considered to be promising candidates in the venoms-to-drugs pipeline. Transcriptomes are important tools for studying the composition and expression of scorpion...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8601437/ https://www.ncbi.nlm.nih.gov/pubmed/34793470 http://dx.doi.org/10.1371/journal.pone.0258712 |
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author | Vonk, Freek J. Bittenbinder, Mátyás A. Kerkkamp, Harald M. I. Grashof, Dwin G. B. Archer, John P. Afonso, Sandra Richardson, Michael K. Kool, Jeroen van der Meijden, Arie |
author_facet | Vonk, Freek J. Bittenbinder, Mátyás A. Kerkkamp, Harald M. I. Grashof, Dwin G. B. Archer, John P. Afonso, Sandra Richardson, Michael K. Kool, Jeroen van der Meijden, Arie |
author_sort | Vonk, Freek J. |
collection | PubMed |
description | Scorpion venoms are mixtures of proteins, peptides and small molecular compounds with high specificity for ion channels and are therefore considered to be promising candidates in the venoms-to-drugs pipeline. Transcriptomes are important tools for studying the composition and expression of scorpion venom. Unfortunately, studying the venom gland transcriptome traditionally requires sacrificing the animal and therefore is always a single snapshot in time. This paper describes a new way of generating a scorpion venom gland transcriptome without sacrificing the animal, thereby allowing the study of the transcriptome at various time points within a single individual. By comparing these venom-derived transcriptomes to the traditional whole-telson transcriptomes we show that the relative expression levels of the major toxin classes are similar. We further performed a multi-day extraction using our proposed method to show the possibility of doing a multiple time point transcriptome analysis. This allows for the study of patterns of toxin gene activation over time a single individual, and allows assessment of the effects of diet, season and other factors that are known or likely to influence intraindividual venom composition. We discuss the gland characteristics that may allow this method to be successful in scorpions and provide a review of other venomous taxa to which this method may potentially be successfully applied. |
format | Online Article Text |
id | pubmed-8601437 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-86014372021-11-19 A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied Vonk, Freek J. Bittenbinder, Mátyás A. Kerkkamp, Harald M. I. Grashof, Dwin G. B. Archer, John P. Afonso, Sandra Richardson, Michael K. Kool, Jeroen van der Meijden, Arie PLoS One Research Article Scorpion venoms are mixtures of proteins, peptides and small molecular compounds with high specificity for ion channels and are therefore considered to be promising candidates in the venoms-to-drugs pipeline. Transcriptomes are important tools for studying the composition and expression of scorpion venom. Unfortunately, studying the venom gland transcriptome traditionally requires sacrificing the animal and therefore is always a single snapshot in time. This paper describes a new way of generating a scorpion venom gland transcriptome without sacrificing the animal, thereby allowing the study of the transcriptome at various time points within a single individual. By comparing these venom-derived transcriptomes to the traditional whole-telson transcriptomes we show that the relative expression levels of the major toxin classes are similar. We further performed a multi-day extraction using our proposed method to show the possibility of doing a multiple time point transcriptome analysis. This allows for the study of patterns of toxin gene activation over time a single individual, and allows assessment of the effects of diet, season and other factors that are known or likely to influence intraindividual venom composition. We discuss the gland characteristics that may allow this method to be successful in scorpions and provide a review of other venomous taxa to which this method may potentially be successfully applied. Public Library of Science 2021-11-18 /pmc/articles/PMC8601437/ /pubmed/34793470 http://dx.doi.org/10.1371/journal.pone.0258712 Text en © 2021 Vonk et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Vonk, Freek J. Bittenbinder, Mátyás A. Kerkkamp, Harald M. I. Grashof, Dwin G. B. Archer, John P. Afonso, Sandra Richardson, Michael K. Kool, Jeroen van der Meijden, Arie A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
title | A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
title_full | A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
title_fullStr | A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
title_full_unstemmed | A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
title_short | A non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
title_sort | non-lethal method for studying scorpion venom gland transcriptomes, with a review of potentially suitable taxa to which it can be applied |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8601437/ https://www.ncbi.nlm.nih.gov/pubmed/34793470 http://dx.doi.org/10.1371/journal.pone.0258712 |
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