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On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach

Hybrid models of genetic regulatory networks allow for a simpler analysis with respect to fully detailed quantitative models, still maintaining the main dynamical features of interest. In this paper we consider a piecewise affine model of a genetic regulatory network, in which the parameters describ...

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Detalles Bibliográficos
Autores principales: Pasquini, Mirko, Angeli, David
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8602168/
https://www.ncbi.nlm.nih.gov/pubmed/34792652
http://dx.doi.org/10.1007/s00285-021-01690-3
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author Pasquini, Mirko
Angeli, David
author_facet Pasquini, Mirko
Angeli, David
author_sort Pasquini, Mirko
collection PubMed
description Hybrid models of genetic regulatory networks allow for a simpler analysis with respect to fully detailed quantitative models, still maintaining the main dynamical features of interest. In this paper we consider a piecewise affine model of a genetic regulatory network, in which the parameters describing the production function are affected by polytopic uncertainties. In the first part of the paper, after recalling how the problem of finding a Lyapunov function is solved in the nominal case, we present the considered polytopic uncertain system and then, after describing how to deal with sliding mode solutions, we prove a result of existence of a parameter dependent Lyapunov function subject to the solution of a feasibility linear matrix inequalities problem. In the second part of the paper, based on the previously described Lyapunov function, we are able to determine a set of domains where the system is guaranteed to converge, with the exception of a zero measure set of times, independently from the uncertainty realization. Finally a three nodes network example shows the validity of the results.
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spelling pubmed-86021682021-12-03 On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach Pasquini, Mirko Angeli, David J Math Biol Article Hybrid models of genetic regulatory networks allow for a simpler analysis with respect to fully detailed quantitative models, still maintaining the main dynamical features of interest. In this paper we consider a piecewise affine model of a genetic regulatory network, in which the parameters describing the production function are affected by polytopic uncertainties. In the first part of the paper, after recalling how the problem of finding a Lyapunov function is solved in the nominal case, we present the considered polytopic uncertain system and then, after describing how to deal with sliding mode solutions, we prove a result of existence of a parameter dependent Lyapunov function subject to the solution of a feasibility linear matrix inequalities problem. In the second part of the paper, based on the previously described Lyapunov function, we are able to determine a set of domains where the system is guaranteed to converge, with the exception of a zero measure set of times, independently from the uncertainty realization. Finally a three nodes network example shows the validity of the results. Springer Berlin Heidelberg 2021-11-18 2021 /pmc/articles/PMC8602168/ /pubmed/34792652 http://dx.doi.org/10.1007/s00285-021-01690-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Pasquini, Mirko
Angeli, David
On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
title On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
title_full On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
title_fullStr On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
title_full_unstemmed On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
title_short On convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a Lyapunov approach
title_sort on convergence for hybrid models of gene regulatory networks under polytopic uncertainties: a lyapunov approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8602168/
https://www.ncbi.nlm.nih.gov/pubmed/34792652
http://dx.doi.org/10.1007/s00285-021-01690-3
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