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Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer

Tumor metabolism patterns have been reported to be associated with the prognosis of many cancers. However, the metabolic mechanisms underlying prostate cancer (PCa) remain unknown. This study aimed to explore the metabolic characteristics of PCa. First, we downloaded mRNA expression data and clinica...

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Autores principales: Zhang, Yanlong, Liang, Xuezhi, Zhang, Liyun, Wang, Dongwen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8602249/
https://www.ncbi.nlm.nih.gov/pubmed/34795309
http://dx.doi.org/10.1038/s41598-021-01140-6
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author Zhang, Yanlong
Liang, Xuezhi
Zhang, Liyun
Wang, Dongwen
author_facet Zhang, Yanlong
Liang, Xuezhi
Zhang, Liyun
Wang, Dongwen
author_sort Zhang, Yanlong
collection PubMed
description Tumor metabolism patterns have been reported to be associated with the prognosis of many cancers. However, the metabolic mechanisms underlying prostate cancer (PCa) remain unknown. This study aimed to explore the metabolic characteristics of PCa. First, we downloaded mRNA expression data and clinical information of PCa samples from multiple databases and quantified the metabolic pathway activity level using single-sample gene set enrichment analysis (ssGSEA). Through unsupervised clustering and principal component analyses, we explored metabolic characteristics and constructed a metabolic score for PCa. Then, we independently validated the prognostic value of our metabolic score and the nomogram based on the metabolic score in multiple databases. Next, we found the metabolic score to be closely related to the tumor microenvironment and DNA mutation using multi-omics data and ssGSEA. Finally, we found different features of drug sensitivity in PCa patients in the high/low metabolic score groups. In total, 1232 samples were analyzed in the present study. Overall, an improved understanding of tumor metabolism through the characterization of metabolic clusters and metabolic score may help clinicians predict prognosis and aid the development of more personalized anti-tumor therapeutic strategies for PCa.
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spelling pubmed-86022492021-11-19 Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer Zhang, Yanlong Liang, Xuezhi Zhang, Liyun Wang, Dongwen Sci Rep Article Tumor metabolism patterns have been reported to be associated with the prognosis of many cancers. However, the metabolic mechanisms underlying prostate cancer (PCa) remain unknown. This study aimed to explore the metabolic characteristics of PCa. First, we downloaded mRNA expression data and clinical information of PCa samples from multiple databases and quantified the metabolic pathway activity level using single-sample gene set enrichment analysis (ssGSEA). Through unsupervised clustering and principal component analyses, we explored metabolic characteristics and constructed a metabolic score for PCa. Then, we independently validated the prognostic value of our metabolic score and the nomogram based on the metabolic score in multiple databases. Next, we found the metabolic score to be closely related to the tumor microenvironment and DNA mutation using multi-omics data and ssGSEA. Finally, we found different features of drug sensitivity in PCa patients in the high/low metabolic score groups. In total, 1232 samples were analyzed in the present study. Overall, an improved understanding of tumor metabolism through the characterization of metabolic clusters and metabolic score may help clinicians predict prognosis and aid the development of more personalized anti-tumor therapeutic strategies for PCa. Nature Publishing Group UK 2021-11-18 /pmc/articles/PMC8602249/ /pubmed/34795309 http://dx.doi.org/10.1038/s41598-021-01140-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Zhang, Yanlong
Liang, Xuezhi
Zhang, Liyun
Wang, Dongwen
Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
title Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
title_full Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
title_fullStr Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
title_full_unstemmed Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
title_short Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
title_sort metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8602249/
https://www.ncbi.nlm.nih.gov/pubmed/34795309
http://dx.doi.org/10.1038/s41598-021-01140-6
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