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Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer
Tumor metabolism patterns have been reported to be associated with the prognosis of many cancers. However, the metabolic mechanisms underlying prostate cancer (PCa) remain unknown. This study aimed to explore the metabolic characteristics of PCa. First, we downloaded mRNA expression data and clinica...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8602249/ https://www.ncbi.nlm.nih.gov/pubmed/34795309 http://dx.doi.org/10.1038/s41598-021-01140-6 |
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author | Zhang, Yanlong Liang, Xuezhi Zhang, Liyun Wang, Dongwen |
author_facet | Zhang, Yanlong Liang, Xuezhi Zhang, Liyun Wang, Dongwen |
author_sort | Zhang, Yanlong |
collection | PubMed |
description | Tumor metabolism patterns have been reported to be associated with the prognosis of many cancers. However, the metabolic mechanisms underlying prostate cancer (PCa) remain unknown. This study aimed to explore the metabolic characteristics of PCa. First, we downloaded mRNA expression data and clinical information of PCa samples from multiple databases and quantified the metabolic pathway activity level using single-sample gene set enrichment analysis (ssGSEA). Through unsupervised clustering and principal component analyses, we explored metabolic characteristics and constructed a metabolic score for PCa. Then, we independently validated the prognostic value of our metabolic score and the nomogram based on the metabolic score in multiple databases. Next, we found the metabolic score to be closely related to the tumor microenvironment and DNA mutation using multi-omics data and ssGSEA. Finally, we found different features of drug sensitivity in PCa patients in the high/low metabolic score groups. In total, 1232 samples were analyzed in the present study. Overall, an improved understanding of tumor metabolism through the characterization of metabolic clusters and metabolic score may help clinicians predict prognosis and aid the development of more personalized anti-tumor therapeutic strategies for PCa. |
format | Online Article Text |
id | pubmed-8602249 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-86022492021-11-19 Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer Zhang, Yanlong Liang, Xuezhi Zhang, Liyun Wang, Dongwen Sci Rep Article Tumor metabolism patterns have been reported to be associated with the prognosis of many cancers. However, the metabolic mechanisms underlying prostate cancer (PCa) remain unknown. This study aimed to explore the metabolic characteristics of PCa. First, we downloaded mRNA expression data and clinical information of PCa samples from multiple databases and quantified the metabolic pathway activity level using single-sample gene set enrichment analysis (ssGSEA). Through unsupervised clustering and principal component analyses, we explored metabolic characteristics and constructed a metabolic score for PCa. Then, we independently validated the prognostic value of our metabolic score and the nomogram based on the metabolic score in multiple databases. Next, we found the metabolic score to be closely related to the tumor microenvironment and DNA mutation using multi-omics data and ssGSEA. Finally, we found different features of drug sensitivity in PCa patients in the high/low metabolic score groups. In total, 1232 samples were analyzed in the present study. Overall, an improved understanding of tumor metabolism through the characterization of metabolic clusters and metabolic score may help clinicians predict prognosis and aid the development of more personalized anti-tumor therapeutic strategies for PCa. Nature Publishing Group UK 2021-11-18 /pmc/articles/PMC8602249/ /pubmed/34795309 http://dx.doi.org/10.1038/s41598-021-01140-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Zhang, Yanlong Liang, Xuezhi Zhang, Liyun Wang, Dongwen Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
title | Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
title_full | Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
title_fullStr | Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
title_full_unstemmed | Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
title_short | Metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
title_sort | metabolic characterization and metabolism-score of tumor to predict the prognosis in prostate cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8602249/ https://www.ncbi.nlm.nih.gov/pubmed/34795309 http://dx.doi.org/10.1038/s41598-021-01140-6 |
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