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Modeling the effect of the vaccination campaign on the COVID-19 pandemic

Population-wide vaccination is critical for containing the SARS-CoV-2 (COVID-19) pandemic when combined with restrictive and prevention measures. In this study we introduce SAIVR, a mathematical model able to forecast the COVID-19 epidemic evolution during the vaccination campaign. SAIVR extends the...

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Autores principales: Angeli, Mattia, Neofotistos, Georgios, Mattheakis, Marios, Kaxiras, Efthimios
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier Ltd. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8603113/
https://www.ncbi.nlm.nih.gov/pubmed/34815624
http://dx.doi.org/10.1016/j.chaos.2021.111621
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author Angeli, Mattia
Neofotistos, Georgios
Mattheakis, Marios
Kaxiras, Efthimios
author_facet Angeli, Mattia
Neofotistos, Georgios
Mattheakis, Marios
Kaxiras, Efthimios
author_sort Angeli, Mattia
collection PubMed
description Population-wide vaccination is critical for containing the SARS-CoV-2 (COVID-19) pandemic when combined with restrictive and prevention measures. In this study we introduce SAIVR, a mathematical model able to forecast the COVID-19 epidemic evolution during the vaccination campaign. SAIVR extends the widely used Susceptible-Infectious-Removed (SIR) model by considering the Asymptomatic (A) and Vaccinated (V) compartments. The model contains several parameters and initial conditions that are estimated by employing a semi-supervised machine learning procedure. After training an unsupervised neural network to solve the SAIVR differential equations, a supervised framework then estimates the optimal conditions and parameters that best fit recent infectious curves of 27 countries. Instructed by these results, we performed an extensive study on the temporal evolution of the pandemic under varying values of roll-out daily rates, vaccine efficacy, and a broad range of societal vaccine hesitancy/denial levels. The concept of herd immunity is questioned by studying future scenarios which involve different vaccination efforts and more infectious COVID-19 variants.
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spelling pubmed-86031132021-11-19 Modeling the effect of the vaccination campaign on the COVID-19 pandemic Angeli, Mattia Neofotistos, Georgios Mattheakis, Marios Kaxiras, Efthimios Chaos Solitons Fractals Article Population-wide vaccination is critical for containing the SARS-CoV-2 (COVID-19) pandemic when combined with restrictive and prevention measures. In this study we introduce SAIVR, a mathematical model able to forecast the COVID-19 epidemic evolution during the vaccination campaign. SAIVR extends the widely used Susceptible-Infectious-Removed (SIR) model by considering the Asymptomatic (A) and Vaccinated (V) compartments. The model contains several parameters and initial conditions that are estimated by employing a semi-supervised machine learning procedure. After training an unsupervised neural network to solve the SAIVR differential equations, a supervised framework then estimates the optimal conditions and parameters that best fit recent infectious curves of 27 countries. Instructed by these results, we performed an extensive study on the temporal evolution of the pandemic under varying values of roll-out daily rates, vaccine efficacy, and a broad range of societal vaccine hesitancy/denial levels. The concept of herd immunity is questioned by studying future scenarios which involve different vaccination efforts and more infectious COVID-19 variants. Elsevier Ltd. 2022-01 2021-11-19 /pmc/articles/PMC8603113/ /pubmed/34815624 http://dx.doi.org/10.1016/j.chaos.2021.111621 Text en © 2021 Elsevier Ltd. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Angeli, Mattia
Neofotistos, Georgios
Mattheakis, Marios
Kaxiras, Efthimios
Modeling the effect of the vaccination campaign on the COVID-19 pandemic
title Modeling the effect of the vaccination campaign on the COVID-19 pandemic
title_full Modeling the effect of the vaccination campaign on the COVID-19 pandemic
title_fullStr Modeling the effect of the vaccination campaign on the COVID-19 pandemic
title_full_unstemmed Modeling the effect of the vaccination campaign on the COVID-19 pandemic
title_short Modeling the effect of the vaccination campaign on the COVID-19 pandemic
title_sort modeling the effect of the vaccination campaign on the covid-19 pandemic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8603113/
https://www.ncbi.nlm.nih.gov/pubmed/34815624
http://dx.doi.org/10.1016/j.chaos.2021.111621
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