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Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning
Photoacoustic (PA) microscopy allows imaging of the soft biological tissue based on optical absorption contrast and spatial ultrasound resolution. One of the major applications of PA imaging is its characterization of microvasculature. However, the strong PA signal from skin layer overshadowed the s...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8603312/ https://www.ncbi.nlm.nih.gov/pubmed/34824975 http://dx.doi.org/10.1016/j.pacs.2021.100310 |
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author | Ly, Cao Duong Nguyen, Van Tu Vo, Tan Hung Mondal, Sudip Park, Sumin Choi, Jaeyeop Vu, Thi Thu Ha Kim, Chang-Seok Oh, Junghwan |
author_facet | Ly, Cao Duong Nguyen, Van Tu Vo, Tan Hung Mondal, Sudip Park, Sumin Choi, Jaeyeop Vu, Thi Thu Ha Kim, Chang-Seok Oh, Junghwan |
author_sort | Ly, Cao Duong |
collection | PubMed |
description | Photoacoustic (PA) microscopy allows imaging of the soft biological tissue based on optical absorption contrast and spatial ultrasound resolution. One of the major applications of PA imaging is its characterization of microvasculature. However, the strong PA signal from skin layer overshadowed the subcutaneous blood vessels leading to indirectly reconstruct the PA images in human study. Addressing the present situation, we examined a deep learning (DL) automatic algorithm to achieve high-resolution and high-contrast segmentation for widening PA imaging applications. In this research, we propose a DL model based on modified U-Net for extracting the relationship features between amplitudes of the generated PA signal from skin and underlying vessels. This study illustrates the broader potential of hybrid complex network as an automatic segmentation tool for the in vivo PA imaging. With DL-infused solution, our result outperforms the previous studies with achieved real-time semantic segmentation on large-size high-resolution PA images. |
format | Online Article Text |
id | pubmed-8603312 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-86033122021-11-24 Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning Ly, Cao Duong Nguyen, Van Tu Vo, Tan Hung Mondal, Sudip Park, Sumin Choi, Jaeyeop Vu, Thi Thu Ha Kim, Chang-Seok Oh, Junghwan Photoacoustics Research Article Photoacoustic (PA) microscopy allows imaging of the soft biological tissue based on optical absorption contrast and spatial ultrasound resolution. One of the major applications of PA imaging is its characterization of microvasculature. However, the strong PA signal from skin layer overshadowed the subcutaneous blood vessels leading to indirectly reconstruct the PA images in human study. Addressing the present situation, we examined a deep learning (DL) automatic algorithm to achieve high-resolution and high-contrast segmentation for widening PA imaging applications. In this research, we propose a DL model based on modified U-Net for extracting the relationship features between amplitudes of the generated PA signal from skin and underlying vessels. This study illustrates the broader potential of hybrid complex network as an automatic segmentation tool for the in vivo PA imaging. With DL-infused solution, our result outperforms the previous studies with achieved real-time semantic segmentation on large-size high-resolution PA images. Elsevier 2021-10-20 /pmc/articles/PMC8603312/ /pubmed/34824975 http://dx.doi.org/10.1016/j.pacs.2021.100310 Text en © 2021 Published by Elsevier GmbH. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Ly, Cao Duong Nguyen, Van Tu Vo, Tan Hung Mondal, Sudip Park, Sumin Choi, Jaeyeop Vu, Thi Thu Ha Kim, Chang-Seok Oh, Junghwan Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
title | Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
title_full | Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
title_fullStr | Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
title_full_unstemmed | Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
title_short | Full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
title_sort | full-view in vivo skin and blood vessels profile segmentation in photoacoustic imaging based on deep learning |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8603312/ https://www.ncbi.nlm.nih.gov/pubmed/34824975 http://dx.doi.org/10.1016/j.pacs.2021.100310 |
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