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RBPSpot: Learning on appropriate contextual information for RBP binding sites discovery

Identifying the factors determining the RBP-RNA interactions remains a big challenge. It involves sparse binding motifs and a suitable sequence context for binding. The present work describes an approach to detect RBP binding sites in RNAs using an ultra-fast inexact k-mers search for statistically...

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Detalles Bibliográficos
Autores principales: Sharma, Nitesh Kumar, Gupta, Sagar, Kumar, Ashwani, Kumar, Prakash, Pradhan, Upendra Kumar, Shankar, Ravi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8605353/
https://www.ncbi.nlm.nih.gov/pubmed/34841226
http://dx.doi.org/10.1016/j.isci.2021.103381