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VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based m...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606556/ https://www.ncbi.nlm.nih.gov/pubmed/34820394 http://dx.doi.org/10.3389/fmed.2021.750396 |
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author | Mishra, Suraj Wang, Ya Xing Wei, Chuan Chuan Chen, Danny Z. Hu, X. Sharon |
author_facet | Mishra, Suraj Wang, Ya Xing Wei, Chuan Chuan Chen, Danny Z. Hu, X. Sharon |
author_sort | Mishra, Suraj |
collection | PubMed |
description | From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based models, have been known. However, the inability of traditional graph based methods to utilize deep hierarchical features extracted by CNNs and the limitations of current CNN based methods to incorporate vessel topology information hinder their effectiveness. In this paper, we propose a new CNN based framework, VTG-Net (vessel topology graph network), for retinal A/V classification by incorporating vessel topology information. VTG-Net exploits retinal vessel topology along with CNN features to improve A/V classification accuracy. Specifically, we transform vessel features extracted by CNN in the image domain into a graph representation preserving the vessel topology. Then by exploiting a graph convolutional network (GCN), we enable our model to learn both CNN features and vessel topological features simultaneously. The final predication is attained by fusing the CNN and GCN outputs. Using a publicly available AV-DRIVE dataset and an in-house dataset, we verify the high performance of our VTG-Net for retinal A/V classification over state-of-the-art methods (with ~2% improvement in accuracy on the AV-DRIVE dataset). |
format | Online Article Text |
id | pubmed-8606556 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86065562021-11-23 VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification Mishra, Suraj Wang, Ya Xing Wei, Chuan Chuan Chen, Danny Z. Hu, X. Sharon Front Med (Lausanne) Medicine From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based models, have been known. However, the inability of traditional graph based methods to utilize deep hierarchical features extracted by CNNs and the limitations of current CNN based methods to incorporate vessel topology information hinder their effectiveness. In this paper, we propose a new CNN based framework, VTG-Net (vessel topology graph network), for retinal A/V classification by incorporating vessel topology information. VTG-Net exploits retinal vessel topology along with CNN features to improve A/V classification accuracy. Specifically, we transform vessel features extracted by CNN in the image domain into a graph representation preserving the vessel topology. Then by exploiting a graph convolutional network (GCN), we enable our model to learn both CNN features and vessel topological features simultaneously. The final predication is attained by fusing the CNN and GCN outputs. Using a publicly available AV-DRIVE dataset and an in-house dataset, we verify the high performance of our VTG-Net for retinal A/V classification over state-of-the-art methods (with ~2% improvement in accuracy on the AV-DRIVE dataset). Frontiers Media S.A. 2021-11-08 /pmc/articles/PMC8606556/ /pubmed/34820394 http://dx.doi.org/10.3389/fmed.2021.750396 Text en Copyright © 2021 Mishra, Wang, Wei, Chen and Hu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Medicine Mishra, Suraj Wang, Ya Xing Wei, Chuan Chuan Chen, Danny Z. Hu, X. Sharon VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification |
title | VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification |
title_full | VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification |
title_fullStr | VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification |
title_full_unstemmed | VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification |
title_short | VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification |
title_sort | vtg-net: a cnn based vessel topology graph network for retinal artery/vein classification |
topic | Medicine |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606556/ https://www.ncbi.nlm.nih.gov/pubmed/34820394 http://dx.doi.org/10.3389/fmed.2021.750396 |
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