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VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification

From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based m...

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Autores principales: Mishra, Suraj, Wang, Ya Xing, Wei, Chuan Chuan, Chen, Danny Z., Hu, X. Sharon
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606556/
https://www.ncbi.nlm.nih.gov/pubmed/34820394
http://dx.doi.org/10.3389/fmed.2021.750396
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author Mishra, Suraj
Wang, Ya Xing
Wei, Chuan Chuan
Chen, Danny Z.
Hu, X. Sharon
author_facet Mishra, Suraj
Wang, Ya Xing
Wei, Chuan Chuan
Chen, Danny Z.
Hu, X. Sharon
author_sort Mishra, Suraj
collection PubMed
description From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based models, have been known. However, the inability of traditional graph based methods to utilize deep hierarchical features extracted by CNNs and the limitations of current CNN based methods to incorporate vessel topology information hinder their effectiveness. In this paper, we propose a new CNN based framework, VTG-Net (vessel topology graph network), for retinal A/V classification by incorporating vessel topology information. VTG-Net exploits retinal vessel topology along with CNN features to improve A/V classification accuracy. Specifically, we transform vessel features extracted by CNN in the image domain into a graph representation preserving the vessel topology. Then by exploiting a graph convolutional network (GCN), we enable our model to learn both CNN features and vessel topological features simultaneously. The final predication is attained by fusing the CNN and GCN outputs. Using a publicly available AV-DRIVE dataset and an in-house dataset, we verify the high performance of our VTG-Net for retinal A/V classification over state-of-the-art methods (with ~2% improvement in accuracy on the AV-DRIVE dataset).
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spelling pubmed-86065562021-11-23 VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification Mishra, Suraj Wang, Ya Xing Wei, Chuan Chuan Chen, Danny Z. Hu, X. Sharon Front Med (Lausanne) Medicine From diagnosing cardiovascular diseases to analyzing the progression of diabetic retinopathy, accurate retinal artery/vein (A/V) classification is critical. Promising approaches for A/V classification, ranging from conventional graph based methods to recent convolutional neural network (CNN) based models, have been known. However, the inability of traditional graph based methods to utilize deep hierarchical features extracted by CNNs and the limitations of current CNN based methods to incorporate vessel topology information hinder their effectiveness. In this paper, we propose a new CNN based framework, VTG-Net (vessel topology graph network), for retinal A/V classification by incorporating vessel topology information. VTG-Net exploits retinal vessel topology along with CNN features to improve A/V classification accuracy. Specifically, we transform vessel features extracted by CNN in the image domain into a graph representation preserving the vessel topology. Then by exploiting a graph convolutional network (GCN), we enable our model to learn both CNN features and vessel topological features simultaneously. The final predication is attained by fusing the CNN and GCN outputs. Using a publicly available AV-DRIVE dataset and an in-house dataset, we verify the high performance of our VTG-Net for retinal A/V classification over state-of-the-art methods (with ~2% improvement in accuracy on the AV-DRIVE dataset). Frontiers Media S.A. 2021-11-08 /pmc/articles/PMC8606556/ /pubmed/34820394 http://dx.doi.org/10.3389/fmed.2021.750396 Text en Copyright © 2021 Mishra, Wang, Wei, Chen and Hu. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Medicine
Mishra, Suraj
Wang, Ya Xing
Wei, Chuan Chuan
Chen, Danny Z.
Hu, X. Sharon
VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
title VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
title_full VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
title_fullStr VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
title_full_unstemmed VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
title_short VTG-Net: A CNN Based Vessel Topology Graph Network for Retinal Artery/Vein Classification
title_sort vtg-net: a cnn based vessel topology graph network for retinal artery/vein classification
topic Medicine
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606556/
https://www.ncbi.nlm.nih.gov/pubmed/34820394
http://dx.doi.org/10.3389/fmed.2021.750396
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