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CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma

PURPOSE: To develop and validate a machine learning classifier based on multidetector computed tomography (MDCT), for the preoperative prediction of tumor–stroma ratio (TSR) expression in patients with pancreatic ductal adenocarcinoma (PDAC). MATERIALS AND METHODS: In this retrospective study, 227 p...

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Autores principales: Meng, Yinghao, Zhang, Hao, Li, Qi, Liu, Fang, Fang, Xu, Li, Jing, Yu, Jieyu, Feng, Xiaochen, Zhu, Mengmeng, Li, Na, Jing, Guodong, Wang, Li, Ma, Chao, Lu, Jianping, Bian, Yun, Shao, Chengwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606777/
https://www.ncbi.nlm.nih.gov/pubmed/34820324
http://dx.doi.org/10.3389/fonc.2021.707288
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author Meng, Yinghao
Zhang, Hao
Li, Qi
Liu, Fang
Fang, Xu
Li, Jing
Yu, Jieyu
Feng, Xiaochen
Zhu, Mengmeng
Li, Na
Jing, Guodong
Wang, Li
Ma, Chao
Lu, Jianping
Bian, Yun
Shao, Chengwei
author_facet Meng, Yinghao
Zhang, Hao
Li, Qi
Liu, Fang
Fang, Xu
Li, Jing
Yu, Jieyu
Feng, Xiaochen
Zhu, Mengmeng
Li, Na
Jing, Guodong
Wang, Li
Ma, Chao
Lu, Jianping
Bian, Yun
Shao, Chengwei
author_sort Meng, Yinghao
collection PubMed
description PURPOSE: To develop and validate a machine learning classifier based on multidetector computed tomography (MDCT), for the preoperative prediction of tumor–stroma ratio (TSR) expression in patients with pancreatic ductal adenocarcinoma (PDAC). MATERIALS AND METHODS: In this retrospective study, 227 patients with PDAC underwent an MDCT scan and surgical resection. We quantified the TSR by using hematoxylin and eosin staining and extracted 1409 arterial and portal venous phase radiomics features for each patient, respectively. Moreover, we used the least absolute shrinkage and selection operator logistic regression algorithm to reduce the features. The extreme gradient boosting (XGBoost) was developed using a training set consisting of 167 consecutive patients, admitted between December 2016 and December 2017. The model was validated in 60 consecutive patients, admitted between January 2018 and April 2018. We determined the XGBoost classifier performance based on its discriminative ability, calibration, and clinical utility. RESULTS: We observed low and high TSR in 91 (40.09%) and 136 (59.91%) patients, respectively. A log-rank test revealed significantly longer survival for patients in the TSR-low group than those in the TSR-high group. The prediction model revealed good discrimination in the training (area under the curve [AUC]= 0.93) and moderate discrimination in the validation set (AUC= 0.63). While the sensitivity, specificity, accuracy, positive predictive value, and negative predictive value for the training set were 94.06%, 81.82%, 0.89, 0.89, and 0.90, respectively, those for the validation set were 85.71%, 48.00%, 0.70, 0.70, and 0.71, respectively. CONCLUSIONS: The CT radiomics-based XGBoost classifier provides a potentially valuable noninvasive tool to predict TSR in patients with PDAC and optimize risk stratification.
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spelling pubmed-86067772021-11-23 CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma Meng, Yinghao Zhang, Hao Li, Qi Liu, Fang Fang, Xu Li, Jing Yu, Jieyu Feng, Xiaochen Zhu, Mengmeng Li, Na Jing, Guodong Wang, Li Ma, Chao Lu, Jianping Bian, Yun Shao, Chengwei Front Oncol Oncology PURPOSE: To develop and validate a machine learning classifier based on multidetector computed tomography (MDCT), for the preoperative prediction of tumor–stroma ratio (TSR) expression in patients with pancreatic ductal adenocarcinoma (PDAC). MATERIALS AND METHODS: In this retrospective study, 227 patients with PDAC underwent an MDCT scan and surgical resection. We quantified the TSR by using hematoxylin and eosin staining and extracted 1409 arterial and portal venous phase radiomics features for each patient, respectively. Moreover, we used the least absolute shrinkage and selection operator logistic regression algorithm to reduce the features. The extreme gradient boosting (XGBoost) was developed using a training set consisting of 167 consecutive patients, admitted between December 2016 and December 2017. The model was validated in 60 consecutive patients, admitted between January 2018 and April 2018. We determined the XGBoost classifier performance based on its discriminative ability, calibration, and clinical utility. RESULTS: We observed low and high TSR in 91 (40.09%) and 136 (59.91%) patients, respectively. A log-rank test revealed significantly longer survival for patients in the TSR-low group than those in the TSR-high group. The prediction model revealed good discrimination in the training (area under the curve [AUC]= 0.93) and moderate discrimination in the validation set (AUC= 0.63). While the sensitivity, specificity, accuracy, positive predictive value, and negative predictive value for the training set were 94.06%, 81.82%, 0.89, 0.89, and 0.90, respectively, those for the validation set were 85.71%, 48.00%, 0.70, 0.70, and 0.71, respectively. CONCLUSIONS: The CT radiomics-based XGBoost classifier provides a potentially valuable noninvasive tool to predict TSR in patients with PDAC and optimize risk stratification. Frontiers Media S.A. 2021-11-08 /pmc/articles/PMC8606777/ /pubmed/34820324 http://dx.doi.org/10.3389/fonc.2021.707288 Text en Copyright © 2021 Meng, Zhang, Li, Liu, Fang, Li, Yu, Feng, Zhu, Li, Jing, Wang, Ma, Lu, Bian and Shao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Meng, Yinghao
Zhang, Hao
Li, Qi
Liu, Fang
Fang, Xu
Li, Jing
Yu, Jieyu
Feng, Xiaochen
Zhu, Mengmeng
Li, Na
Jing, Guodong
Wang, Li
Ma, Chao
Lu, Jianping
Bian, Yun
Shao, Chengwei
CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma
title CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma
title_full CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma
title_fullStr CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma
title_full_unstemmed CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma
title_short CT Radiomics and Machine-Learning Models for Predicting Tumor-Stroma Ratio in Patients With Pancreatic Ductal Adenocarcinoma
title_sort ct radiomics and machine-learning models for predicting tumor-stroma ratio in patients with pancreatic ductal adenocarcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606777/
https://www.ncbi.nlm.nih.gov/pubmed/34820324
http://dx.doi.org/10.3389/fonc.2021.707288
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