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Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design
Recent development of the quick contrast sensitivity function (qCSF) method has made it possible to obtain accurate, precise, and efficient contrast sensitivity function (CSF) assessment. To improve statistical inference on CSF changes in a within-subject design, we developed a hierarchical Bayesian...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606820/ https://www.ncbi.nlm.nih.gov/pubmed/34792537 http://dx.doi.org/10.1167/jov.21.12.9 |
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author | Zhao, Yukai Lesmes, Luis Andres Hou, Fang Lu, Zhong-Lin |
author_facet | Zhao, Yukai Lesmes, Luis Andres Hou, Fang Lu, Zhong-Lin |
author_sort | Zhao, Yukai |
collection | PubMed |
description | Recent development of the quick contrast sensitivity function (qCSF) method has made it possible to obtain accurate, precise, and efficient contrast sensitivity function (CSF) assessment. To improve statistical inference on CSF changes in a within-subject design, we developed a hierarchical Bayesian model (HBM) to compute the joint distribution of CSF parameters and hyperparameters at test, subject, and population levels, utilizing information within- and between-subjects and experimental conditions. We evaluated the performance of the HBM relative to a non-hierarchical Bayesian inference procedure (BIP) on an existing CSF dataset of 112 subjects obtained with the qCSF method in three luminance conditions (Hou, Lesmes, Kim, Gu, Pitt, Myung, & Lu, 2016). We found that the average d′s of the area under log CSF (AULCSF) and CSF parameters between pairs of luminance conditions at the test-level from the HBM were 33.5% and 103.3% greater than those from the BIP analysis of AULCSF. The increased d′ resulted in greater statistical differences between experimental conditions across subjects. In addition, simulations showed that the HBM generated accurate and precise CSF parameter estimates. These results have strong implications for the application of HBM in clinical trials and patient care. |
format | Online Article Text |
id | pubmed-8606820 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-86068202021-11-23 Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design Zhao, Yukai Lesmes, Luis Andres Hou, Fang Lu, Zhong-Lin J Vis Methods Recent development of the quick contrast sensitivity function (qCSF) method has made it possible to obtain accurate, precise, and efficient contrast sensitivity function (CSF) assessment. To improve statistical inference on CSF changes in a within-subject design, we developed a hierarchical Bayesian model (HBM) to compute the joint distribution of CSF parameters and hyperparameters at test, subject, and population levels, utilizing information within- and between-subjects and experimental conditions. We evaluated the performance of the HBM relative to a non-hierarchical Bayesian inference procedure (BIP) on an existing CSF dataset of 112 subjects obtained with the qCSF method in three luminance conditions (Hou, Lesmes, Kim, Gu, Pitt, Myung, & Lu, 2016). We found that the average d′s of the area under log CSF (AULCSF) and CSF parameters between pairs of luminance conditions at the test-level from the HBM were 33.5% and 103.3% greater than those from the BIP analysis of AULCSF. The increased d′ resulted in greater statistical differences between experimental conditions across subjects. In addition, simulations showed that the HBM generated accurate and precise CSF parameter estimates. These results have strong implications for the application of HBM in clinical trials and patient care. The Association for Research in Vision and Ophthalmology 2021-11-18 /pmc/articles/PMC8606820/ /pubmed/34792537 http://dx.doi.org/10.1167/jov.21.12.9 Text en Copyright 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Methods Zhao, Yukai Lesmes, Luis Andres Hou, Fang Lu, Zhong-Lin Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design |
title | Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design |
title_full | Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design |
title_fullStr | Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design |
title_full_unstemmed | Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design |
title_short | Hierarchical Bayesian modeling of contrast sensitivity functions in a within-subject design |
title_sort | hierarchical bayesian modeling of contrast sensitivity functions in a within-subject design |
topic | Methods |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8606820/ https://www.ncbi.nlm.nih.gov/pubmed/34792537 http://dx.doi.org/10.1167/jov.21.12.9 |
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