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Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas
OBJECTIVE: To explore the role and possible regulatory mechanisms of CYP2E1 in gliomas. METHODS: RNA‑seq data and corresponding clinical information of glioma patients were collected from The Cancer Genome Atlas and Chinese Glioma Genome Atlas, and mRNA data of normal brain tissues were obtained by...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8607268/ https://www.ncbi.nlm.nih.gov/pubmed/34612013 http://dx.doi.org/10.1002/cam4.4320 |
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author | Ye, Liguo Xu, Yang Wang, Long Zhang, Chunyu Hu, Ping Tong, Shi’ao Liu, Zhennan Tian, Daofeng |
author_facet | Ye, Liguo Xu, Yang Wang, Long Zhang, Chunyu Hu, Ping Tong, Shi’ao Liu, Zhennan Tian, Daofeng |
author_sort | Ye, Liguo |
collection | PubMed |
description | OBJECTIVE: To explore the role and possible regulatory mechanisms of CYP2E1 in gliomas. METHODS: RNA‑seq data and corresponding clinical information of glioma patients were collected from The Cancer Genome Atlas and Chinese Glioma Genome Atlas, and mRNA data of normal brain tissues were obtained by the Genotype‐Tissue Expression project. The Wilcoxon test was performed to analyze the correlation between CYP2E1 expression and glioma subtypes. Univariate and multivariate Cox proportional hazards regression, receiver operating characteristic curves, and Kaplan–Meier plots were used to evaluate the prognostic value of CYP2E1 in glioma. Functional enrichment analyses and immune infiltration analyses were performed to investigate the potential function of CYP2E1 in gliomas. Moreover, we investigated the miRNA and epigenetic mechanisms that regulate CYP2E1 expression. Finally, network pharmacology and molecular docking experiments were used to predict drugs that target CYP2E1. RESULTS: The downregulation of CYP2E1 expression may predict a poor prognosis for glioma patients. CYP2E1 expression decreased with increasing WHO grade (II–IV), and its level was correlated with clinical features, including age, 1p19q codeletion status, and IDH state in glioma tissues. Furthermore, CYP2E1 was involved in lipid metabolism and ferroptosis and related to the tumor immune microenvironment due to its strong correlation with the levels of infiltrating monocytes and Tregs. Moreover, variation in the total methylation level and copy number of CYP2E1 was moderately correlated with its mRNA expression (p < 0.05). CYP2E1 was predicted to be targeted by hsa‐miR‐527, whose expression was negatively related to CYP2E1 mRNA expression (p < 0.05). In addition, effective compounds that target CYP2E1, including 18beta‐glycyrrhetinic acid, styrene, toluene, nicotine, m‐xylene, p‐xylene, and colchicine, were identified. CONCLUSION: The downregulation of CYP2E1, which affects lipid metabolism and the ferroptosis signaling pathway, promotes the progression of gliomas. |
format | Online Article Text |
id | pubmed-8607268 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-86072682021-11-29 Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas Ye, Liguo Xu, Yang Wang, Long Zhang, Chunyu Hu, Ping Tong, Shi’ao Liu, Zhennan Tian, Daofeng Cancer Med Clinical Cancer Research OBJECTIVE: To explore the role and possible regulatory mechanisms of CYP2E1 in gliomas. METHODS: RNA‑seq data and corresponding clinical information of glioma patients were collected from The Cancer Genome Atlas and Chinese Glioma Genome Atlas, and mRNA data of normal brain tissues were obtained by the Genotype‐Tissue Expression project. The Wilcoxon test was performed to analyze the correlation between CYP2E1 expression and glioma subtypes. Univariate and multivariate Cox proportional hazards regression, receiver operating characteristic curves, and Kaplan–Meier plots were used to evaluate the prognostic value of CYP2E1 in glioma. Functional enrichment analyses and immune infiltration analyses were performed to investigate the potential function of CYP2E1 in gliomas. Moreover, we investigated the miRNA and epigenetic mechanisms that regulate CYP2E1 expression. Finally, network pharmacology and molecular docking experiments were used to predict drugs that target CYP2E1. RESULTS: The downregulation of CYP2E1 expression may predict a poor prognosis for glioma patients. CYP2E1 expression decreased with increasing WHO grade (II–IV), and its level was correlated with clinical features, including age, 1p19q codeletion status, and IDH state in glioma tissues. Furthermore, CYP2E1 was involved in lipid metabolism and ferroptosis and related to the tumor immune microenvironment due to its strong correlation with the levels of infiltrating monocytes and Tregs. Moreover, variation in the total methylation level and copy number of CYP2E1 was moderately correlated with its mRNA expression (p < 0.05). CYP2E1 was predicted to be targeted by hsa‐miR‐527, whose expression was negatively related to CYP2E1 mRNA expression (p < 0.05). In addition, effective compounds that target CYP2E1, including 18beta‐glycyrrhetinic acid, styrene, toluene, nicotine, m‐xylene, p‐xylene, and colchicine, were identified. CONCLUSION: The downregulation of CYP2E1, which affects lipid metabolism and the ferroptosis signaling pathway, promotes the progression of gliomas. John Wiley and Sons Inc. 2021-10-06 /pmc/articles/PMC8607268/ /pubmed/34612013 http://dx.doi.org/10.1002/cam4.4320 Text en © 2021 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Clinical Cancer Research Ye, Liguo Xu, Yang Wang, Long Zhang, Chunyu Hu, Ping Tong, Shi’ao Liu, Zhennan Tian, Daofeng Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas |
title | Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas |
title_full | Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas |
title_fullStr | Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas |
title_full_unstemmed | Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas |
title_short | Downregulation of CYP2E1 is associated with poor prognosis and tumor progression of gliomas |
title_sort | downregulation of cyp2e1 is associated with poor prognosis and tumor progression of gliomas |
topic | Clinical Cancer Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8607268/ https://www.ncbi.nlm.nih.gov/pubmed/34612013 http://dx.doi.org/10.1002/cam4.4320 |
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