Cargando…

Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations

[Image: see text] The accurate determination of equilibrium structures for isolated molecules plays a central role in the evaluation and interpretation of stereoelectronic, thermodynamic, and spectroscopic properties. For small semi-rigid systems, state-of-the-art quantum-chemical computations can r...

Descripción completa

Detalles Bibliográficos
Autores principales: Melli, Alessio, Tonolo, Francesca, Barone, Vincenzo, Puzzarini, Cristina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8607424/
https://www.ncbi.nlm.nih.gov/pubmed/34752702
http://dx.doi.org/10.1021/acs.jpca.1c07828
_version_ 1784602561589805056
author Melli, Alessio
Tonolo, Francesca
Barone, Vincenzo
Puzzarini, Cristina
author_facet Melli, Alessio
Tonolo, Francesca
Barone, Vincenzo
Puzzarini, Cristina
author_sort Melli, Alessio
collection PubMed
description [Image: see text] The accurate determination of equilibrium structures for isolated molecules plays a central role in the evaluation and interpretation of stereoelectronic, thermodynamic, and spectroscopic properties. For small semi-rigid systems, state-of-the-art quantum-chemical computations can rival the most sophisticated experimental results. For larger molecules, cheaper yet accurate approaches need to be defined. The double-hybrid rev-DSD-PBEP86 functional already delivers remarkable results that can be further improved by means of a “Lego brick” model. This is based on the idea that a molecular system can be seen as formed by different fragments (the “Lego bricks”), whose accurate semi-experimental (SE) equilibrium geometries are available. The template molecule (TM) approach can be used to account for the modifications occurring when going from the isolated fragment to the molecular system under investigation, with the linear regression (LR) model employed to correct the linkage between the different fragments. The resulting TM-SE_LR approach has been tested with respect to available SE equilibrium structures and rotational constants. Indeed, the latter parameters straightforwardly depend on the equilibrium geometry of the system under consideration. The main outcome of our study is the reliability, robustness, and accuracy of this novel approach. The molecular systems considered for benchmarking the TM-SE_LR scheme are those formally issued from addition/elimination reactions of nucleophilic unsaturated radicals (e.g., CN, C(2)H, and phenyl) to alkenes, imines, and aldehydes, whose rotational spectra have been investigated, but accurate structural determinations are not yet available.
format Online
Article
Text
id pubmed-8607424
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Chemical Society
record_format MEDLINE/PubMed
spelling pubmed-86074242021-11-23 Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations Melli, Alessio Tonolo, Francesca Barone, Vincenzo Puzzarini, Cristina J Phys Chem A [Image: see text] The accurate determination of equilibrium structures for isolated molecules plays a central role in the evaluation and interpretation of stereoelectronic, thermodynamic, and spectroscopic properties. For small semi-rigid systems, state-of-the-art quantum-chemical computations can rival the most sophisticated experimental results. For larger molecules, cheaper yet accurate approaches need to be defined. The double-hybrid rev-DSD-PBEP86 functional already delivers remarkable results that can be further improved by means of a “Lego brick” model. This is based on the idea that a molecular system can be seen as formed by different fragments (the “Lego bricks”), whose accurate semi-experimental (SE) equilibrium geometries are available. The template molecule (TM) approach can be used to account for the modifications occurring when going from the isolated fragment to the molecular system under investigation, with the linear regression (LR) model employed to correct the linkage between the different fragments. The resulting TM-SE_LR approach has been tested with respect to available SE equilibrium structures and rotational constants. Indeed, the latter parameters straightforwardly depend on the equilibrium geometry of the system under consideration. The main outcome of our study is the reliability, robustness, and accuracy of this novel approach. The molecular systems considered for benchmarking the TM-SE_LR scheme are those formally issued from addition/elimination reactions of nucleophilic unsaturated radicals (e.g., CN, C(2)H, and phenyl) to alkenes, imines, and aldehydes, whose rotational spectra have been investigated, but accurate structural determinations are not yet available. American Chemical Society 2021-11-09 2021-11-18 /pmc/articles/PMC8607424/ /pubmed/34752702 http://dx.doi.org/10.1021/acs.jpca.1c07828 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Melli, Alessio
Tonolo, Francesca
Barone, Vincenzo
Puzzarini, Cristina
Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
title Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
title_full Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
title_fullStr Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
title_full_unstemmed Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
title_short Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
title_sort extending the applicability of the semi-experimental approach by means of “template molecule” and “linear regression” models on top of dft computations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8607424/
https://www.ncbi.nlm.nih.gov/pubmed/34752702
http://dx.doi.org/10.1021/acs.jpca.1c07828
work_keys_str_mv AT mellialessio extendingtheapplicabilityofthesemiexperimentalapproachbymeansoftemplatemoleculeandlinearregressionmodelsontopofdftcomputations
AT tonolofrancesca extendingtheapplicabilityofthesemiexperimentalapproachbymeansoftemplatemoleculeandlinearregressionmodelsontopofdftcomputations
AT baronevincenzo extendingtheapplicabilityofthesemiexperimentalapproachbymeansoftemplatemoleculeandlinearregressionmodelsontopofdftcomputations
AT puzzarinicristina extendingtheapplicabilityofthesemiexperimentalapproachbymeansoftemplatemoleculeandlinearregressionmodelsontopofdftcomputations