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Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations
[Image: see text] The accurate determination of equilibrium structures for isolated molecules plays a central role in the evaluation and interpretation of stereoelectronic, thermodynamic, and spectroscopic properties. For small semi-rigid systems, state-of-the-art quantum-chemical computations can r...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8607424/ https://www.ncbi.nlm.nih.gov/pubmed/34752702 http://dx.doi.org/10.1021/acs.jpca.1c07828 |
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author | Melli, Alessio Tonolo, Francesca Barone, Vincenzo Puzzarini, Cristina |
author_facet | Melli, Alessio Tonolo, Francesca Barone, Vincenzo Puzzarini, Cristina |
author_sort | Melli, Alessio |
collection | PubMed |
description | [Image: see text] The accurate determination of equilibrium structures for isolated molecules plays a central role in the evaluation and interpretation of stereoelectronic, thermodynamic, and spectroscopic properties. For small semi-rigid systems, state-of-the-art quantum-chemical computations can rival the most sophisticated experimental results. For larger molecules, cheaper yet accurate approaches need to be defined. The double-hybrid rev-DSD-PBEP86 functional already delivers remarkable results that can be further improved by means of a “Lego brick” model. This is based on the idea that a molecular system can be seen as formed by different fragments (the “Lego bricks”), whose accurate semi-experimental (SE) equilibrium geometries are available. The template molecule (TM) approach can be used to account for the modifications occurring when going from the isolated fragment to the molecular system under investigation, with the linear regression (LR) model employed to correct the linkage between the different fragments. The resulting TM-SE_LR approach has been tested with respect to available SE equilibrium structures and rotational constants. Indeed, the latter parameters straightforwardly depend on the equilibrium geometry of the system under consideration. The main outcome of our study is the reliability, robustness, and accuracy of this novel approach. The molecular systems considered for benchmarking the TM-SE_LR scheme are those formally issued from addition/elimination reactions of nucleophilic unsaturated radicals (e.g., CN, C(2)H, and phenyl) to alkenes, imines, and aldehydes, whose rotational spectra have been investigated, but accurate structural determinations are not yet available. |
format | Online Article Text |
id | pubmed-8607424 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-86074242021-11-23 Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations Melli, Alessio Tonolo, Francesca Barone, Vincenzo Puzzarini, Cristina J Phys Chem A [Image: see text] The accurate determination of equilibrium structures for isolated molecules plays a central role in the evaluation and interpretation of stereoelectronic, thermodynamic, and spectroscopic properties. For small semi-rigid systems, state-of-the-art quantum-chemical computations can rival the most sophisticated experimental results. For larger molecules, cheaper yet accurate approaches need to be defined. The double-hybrid rev-DSD-PBEP86 functional already delivers remarkable results that can be further improved by means of a “Lego brick” model. This is based on the idea that a molecular system can be seen as formed by different fragments (the “Lego bricks”), whose accurate semi-experimental (SE) equilibrium geometries are available. The template molecule (TM) approach can be used to account for the modifications occurring when going from the isolated fragment to the molecular system under investigation, with the linear regression (LR) model employed to correct the linkage between the different fragments. The resulting TM-SE_LR approach has been tested with respect to available SE equilibrium structures and rotational constants. Indeed, the latter parameters straightforwardly depend on the equilibrium geometry of the system under consideration. The main outcome of our study is the reliability, robustness, and accuracy of this novel approach. The molecular systems considered for benchmarking the TM-SE_LR scheme are those formally issued from addition/elimination reactions of nucleophilic unsaturated radicals (e.g., CN, C(2)H, and phenyl) to alkenes, imines, and aldehydes, whose rotational spectra have been investigated, but accurate structural determinations are not yet available. American Chemical Society 2021-11-09 2021-11-18 /pmc/articles/PMC8607424/ /pubmed/34752702 http://dx.doi.org/10.1021/acs.jpca.1c07828 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Melli, Alessio Tonolo, Francesca Barone, Vincenzo Puzzarini, Cristina Extending the Applicability of the Semi-experimental Approach by Means of “Template Molecule” and “Linear Regression” Models on Top of DFT Computations |
title | Extending the Applicability of the Semi-experimental
Approach by Means of “Template Molecule” and “Linear
Regression” Models on Top of DFT Computations |
title_full | Extending the Applicability of the Semi-experimental
Approach by Means of “Template Molecule” and “Linear
Regression” Models on Top of DFT Computations |
title_fullStr | Extending the Applicability of the Semi-experimental
Approach by Means of “Template Molecule” and “Linear
Regression” Models on Top of DFT Computations |
title_full_unstemmed | Extending the Applicability of the Semi-experimental
Approach by Means of “Template Molecule” and “Linear
Regression” Models on Top of DFT Computations |
title_short | Extending the Applicability of the Semi-experimental
Approach by Means of “Template Molecule” and “Linear
Regression” Models on Top of DFT Computations |
title_sort | extending the applicability of the semi-experimental
approach by means of “template molecule” and “linear
regression” models on top of dft computations |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8607424/ https://www.ncbi.nlm.nih.gov/pubmed/34752702 http://dx.doi.org/10.1021/acs.jpca.1c07828 |
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