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Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response

Certain innovative technologies applied to medical product development require novel evaluation approaches and/or regulations. Horizon scanning for such technologies will help regulators prepare, allowing earlier access to the product for patients and an improved benefit/risk ratio. This study inves...

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Autores principales: Fujii, Erika, Takata, Takuya, Yamano, Hiroko, Honma, Masashi, Shimokawa, Masafumi, Sasaki, Hajime, Shikano, Mayumi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8608232/
https://www.ncbi.nlm.nih.gov/pubmed/34811710
http://dx.doi.org/10.1007/s43441-021-00351-3
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author Fujii, Erika
Takata, Takuya
Yamano, Hiroko
Honma, Masashi
Shimokawa, Masafumi
Sasaki, Hajime
Shikano, Mayumi
author_facet Fujii, Erika
Takata, Takuya
Yamano, Hiroko
Honma, Masashi
Shimokawa, Masafumi
Sasaki, Hajime
Shikano, Mayumi
author_sort Fujii, Erika
collection PubMed
description Certain innovative technologies applied to medical product development require novel evaluation approaches and/or regulations. Horizon scanning for such technologies will help regulators prepare, allowing earlier access to the product for patients and an improved benefit/risk ratio. This study investigates whether citation network analysis and text mining of scientific papers could be a tool for horizon scanning in the field of immunology, which has developed over a long period, and attempts to grasp the latest research trends. As the result of the analysis, the academic landscape of the immunology field was identified by classifying 90,450 papers (obtained from PubMED) containing the keyword “immune* and t lymph*” into 38 clusters. The clustering was indicative of the research landscape of the immunology field. To confirm this, immune checkpoint inhibitors were used as a retrospective test topic of therapeutics with new mechanisms of action. Retrospective clustering around immune checkpoint inhibitors was found, supporting this approach. The analysis of the research trends over the last 3 to 5 years in this field revealed several candidate topics, including ARID1A gene mutation, CD300e, and tissue resident memory T cells, which shows notable progress and should be monitored for future possible product development. Our results have demonstrated the possibility that citation network analysis and text mining of scientific papers can be a useful objective tool for horizon scanning of life science fields such as immunology. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s43441-021-00351-3.
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spelling pubmed-86082322021-11-23 Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response Fujii, Erika Takata, Takuya Yamano, Hiroko Honma, Masashi Shimokawa, Masafumi Sasaki, Hajime Shikano, Mayumi Ther Innov Regul Sci Original Research Certain innovative technologies applied to medical product development require novel evaluation approaches and/or regulations. Horizon scanning for such technologies will help regulators prepare, allowing earlier access to the product for patients and an improved benefit/risk ratio. This study investigates whether citation network analysis and text mining of scientific papers could be a tool for horizon scanning in the field of immunology, which has developed over a long period, and attempts to grasp the latest research trends. As the result of the analysis, the academic landscape of the immunology field was identified by classifying 90,450 papers (obtained from PubMED) containing the keyword “immune* and t lymph*” into 38 clusters. The clustering was indicative of the research landscape of the immunology field. To confirm this, immune checkpoint inhibitors were used as a retrospective test topic of therapeutics with new mechanisms of action. Retrospective clustering around immune checkpoint inhibitors was found, supporting this approach. The analysis of the research trends over the last 3 to 5 years in this field revealed several candidate topics, including ARID1A gene mutation, CD300e, and tissue resident memory T cells, which shows notable progress and should be monitored for future possible product development. Our results have demonstrated the possibility that citation network analysis and text mining of scientific papers can be a useful objective tool for horizon scanning of life science fields such as immunology. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s43441-021-00351-3. Springer International Publishing 2021-11-22 2022 /pmc/articles/PMC8608232/ /pubmed/34811710 http://dx.doi.org/10.1007/s43441-021-00351-3 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Research
Fujii, Erika
Takata, Takuya
Yamano, Hiroko
Honma, Masashi
Shimokawa, Masafumi
Sasaki, Hajime
Shikano, Mayumi
Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response
title Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response
title_full Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response
title_fullStr Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response
title_full_unstemmed Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response
title_short Study on Horizon Scanning by Citation Network Analysis and Text Mining: A Focus on Drug Development Related to T Cell Immune Response
title_sort study on horizon scanning by citation network analysis and text mining: a focus on drug development related to t cell immune response
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8608232/
https://www.ncbi.nlm.nih.gov/pubmed/34811710
http://dx.doi.org/10.1007/s43441-021-00351-3
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