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Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease

OBJECTIVES: Acquisition-related differences in diffusion magnetic resonance imaging (dMRI) hamper pooling of multicentre data to achieve large sample sizes. A promising solution is to harmonize the raw diffusion signal using rotation invariant spherical harmonic (RISH) features, but this has not bee...

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Autores principales: de Brito Robalo, Bruno M., Biessels, Geert Jan, Chen, Christopher, Dewenter, Anna, Duering, Marco, Hilal, Saima, Koek, Huiberdina L., Kopczak, Anna, Yin Ka Lam, Bonnie, Leemans, Alexander, Mok, Vincent, Onkenhout, Laurien P., van den Brink, Hilde, de Luca, Alberto
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609094/
https://www.ncbi.nlm.nih.gov/pubmed/34911192
http://dx.doi.org/10.1016/j.nicl.2021.102886
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author de Brito Robalo, Bruno M.
Biessels, Geert Jan
Chen, Christopher
Dewenter, Anna
Duering, Marco
Hilal, Saima
Koek, Huiberdina L.
Kopczak, Anna
Yin Ka Lam, Bonnie
Leemans, Alexander
Mok, Vincent
Onkenhout, Laurien P.
van den Brink, Hilde
de Luca, Alberto
author_facet de Brito Robalo, Bruno M.
Biessels, Geert Jan
Chen, Christopher
Dewenter, Anna
Duering, Marco
Hilal, Saima
Koek, Huiberdina L.
Kopczak, Anna
Yin Ka Lam, Bonnie
Leemans, Alexander
Mok, Vincent
Onkenhout, Laurien P.
van den Brink, Hilde
de Luca, Alberto
author_sort de Brito Robalo, Bruno M.
collection PubMed
description OBJECTIVES: Acquisition-related differences in diffusion magnetic resonance imaging (dMRI) hamper pooling of multicentre data to achieve large sample sizes. A promising solution is to harmonize the raw diffusion signal using rotation invariant spherical harmonic (RISH) features, but this has not been tested in elderly subjects. Here we aimed to establish if RISH harmonization effectively removes acquisition-related differences in multicentre dMRI of elderly subjects with cerebral small vessel disease (SVD), while preserving sensitivity to disease effects. METHODS: Five cohorts of patients with SVD (N = 397) and elderly controls (N = 175) with 3 Tesla MRI on different systems were included. First, to establish effectiveness of harmonization, the RISH method was trained with data of 13 to 15 age and sex-matched controls from each site. Fractional anisotropy (FA) and mean diffusivity (MD) were compared in matched controls between sites using tract-based spatial statistics (TBSS) and voxel-wise analysis, before and after harmonization. Second, to assess sensitivity to disease effects, we examined whether the contrast (effect sizes of FA, MD and peak width of skeletonized MD - PSMD) between patients and controls within each site remained unaffected by harmonization. Finally, we evaluated the association between white matter hyperintensity (WMH) burden, FA, MD and PSMD using linear regression analyses both within individual cohorts as well as with pooled scans from multiple sites, before and after harmonization. RESULTS: Before harmonization, significant differences in FA and MD were observed between matched controls of different sites (p < 0.05). After harmonization these site-differences were removed. Within each site, RISH harmonization did not alter the effect sizes of FA, MD and PSMD between patients and controls (relative change in Cohen’s d = 4 %) nor the strength of association with WMH volume (relative change in R(2) = 2.8 %). After harmonization, patient data of all sites could be aggregated in a single analysis to infer the association between WMH volume and FA (R(2) = 0.62), MD (R(2) = 0.64), and PSMD (R(2) = 0.60). CONCLUSIONS: We showed that RISH harmonization effectively removes acquisition-related differences in dMRI of elderly subjects while preserving sensitivity to SVD-related effects. This study provides proof of concept for future multicentre SVD studies with pooled datasets.
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spelling pubmed-86090942021-11-29 Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease de Brito Robalo, Bruno M. Biessels, Geert Jan Chen, Christopher Dewenter, Anna Duering, Marco Hilal, Saima Koek, Huiberdina L. Kopczak, Anna Yin Ka Lam, Bonnie Leemans, Alexander Mok, Vincent Onkenhout, Laurien P. van den Brink, Hilde de Luca, Alberto Neuroimage Clin Regular Article OBJECTIVES: Acquisition-related differences in diffusion magnetic resonance imaging (dMRI) hamper pooling of multicentre data to achieve large sample sizes. A promising solution is to harmonize the raw diffusion signal using rotation invariant spherical harmonic (RISH) features, but this has not been tested in elderly subjects. Here we aimed to establish if RISH harmonization effectively removes acquisition-related differences in multicentre dMRI of elderly subjects with cerebral small vessel disease (SVD), while preserving sensitivity to disease effects. METHODS: Five cohorts of patients with SVD (N = 397) and elderly controls (N = 175) with 3 Tesla MRI on different systems were included. First, to establish effectiveness of harmonization, the RISH method was trained with data of 13 to 15 age and sex-matched controls from each site. Fractional anisotropy (FA) and mean diffusivity (MD) were compared in matched controls between sites using tract-based spatial statistics (TBSS) and voxel-wise analysis, before and after harmonization. Second, to assess sensitivity to disease effects, we examined whether the contrast (effect sizes of FA, MD and peak width of skeletonized MD - PSMD) between patients and controls within each site remained unaffected by harmonization. Finally, we evaluated the association between white matter hyperintensity (WMH) burden, FA, MD and PSMD using linear regression analyses both within individual cohorts as well as with pooled scans from multiple sites, before and after harmonization. RESULTS: Before harmonization, significant differences in FA and MD were observed between matched controls of different sites (p < 0.05). After harmonization these site-differences were removed. Within each site, RISH harmonization did not alter the effect sizes of FA, MD and PSMD between patients and controls (relative change in Cohen’s d = 4 %) nor the strength of association with WMH volume (relative change in R(2) = 2.8 %). After harmonization, patient data of all sites could be aggregated in a single analysis to infer the association between WMH volume and FA (R(2) = 0.62), MD (R(2) = 0.64), and PSMD (R(2) = 0.60). CONCLUSIONS: We showed that RISH harmonization effectively removes acquisition-related differences in dMRI of elderly subjects while preserving sensitivity to SVD-related effects. This study provides proof of concept for future multicentre SVD studies with pooled datasets. Elsevier 2021-11-18 /pmc/articles/PMC8609094/ /pubmed/34911192 http://dx.doi.org/10.1016/j.nicl.2021.102886 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Regular Article
de Brito Robalo, Bruno M.
Biessels, Geert Jan
Chen, Christopher
Dewenter, Anna
Duering, Marco
Hilal, Saima
Koek, Huiberdina L.
Kopczak, Anna
Yin Ka Lam, Bonnie
Leemans, Alexander
Mok, Vincent
Onkenhout, Laurien P.
van den Brink, Hilde
de Luca, Alberto
Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
title Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
title_full Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
title_fullStr Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
title_full_unstemmed Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
title_short Diffusion MRI harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
title_sort diffusion mri harmonization enables joint-analysis of multicentre data of patients with cerebral small vessel disease
topic Regular Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609094/
https://www.ncbi.nlm.nih.gov/pubmed/34911192
http://dx.doi.org/10.1016/j.nicl.2021.102886
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