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Directed Evolution in Drops: Molecular Aspects and Applications

[Image: see text] The process of optimizing the properties of biological molecules is paramount for many industrial and medical applications. Directed evolution is a powerful technique for modifying and improving biomolecules such as proteins or nucleic acids (DNA or RNA). Mimicking the mechanism of...

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Autores principales: Manteca, Aitor, Gadea, Alejandra, Van Assche, David, Cossard, Pauline, Gillard-Bocquet, Mélanie, Beneyton, Thomas, Innis, C. Axel, Baret, Jean-Christophe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609573/
https://www.ncbi.nlm.nih.gov/pubmed/34677942
http://dx.doi.org/10.1021/acssynbio.1c00313
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author Manteca, Aitor
Gadea, Alejandra
Van Assche, David
Cossard, Pauline
Gillard-Bocquet, Mélanie
Beneyton, Thomas
Innis, C. Axel
Baret, Jean-Christophe
author_facet Manteca, Aitor
Gadea, Alejandra
Van Assche, David
Cossard, Pauline
Gillard-Bocquet, Mélanie
Beneyton, Thomas
Innis, C. Axel
Baret, Jean-Christophe
author_sort Manteca, Aitor
collection PubMed
description [Image: see text] The process of optimizing the properties of biological molecules is paramount for many industrial and medical applications. Directed evolution is a powerful technique for modifying and improving biomolecules such as proteins or nucleic acids (DNA or RNA). Mimicking the mechanism of natural evolution, one can enhance a desired property by applying a suitable selection pressure and sorting improved variants. Droplet-based microfluidic systems offer a high-throughput solution to this approach by helping to overcome the limiting screening steps and allowing the analysis of variants within increasingly complex libraries. Here, we review cases where successful evolution of biomolecules was achieved using droplet-based microfluidics, focusing on the molecular processes involved and the incorporation of microfluidics to the workflow. We highlight the advantages and limitations of these microfluidic systems compared to low-throughput methods and show how the integration of these systems into directed evolution workflows can open new avenues to discover or improve biomolecules according to user-defined conditions.
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spelling pubmed-86095732021-11-24 Directed Evolution in Drops: Molecular Aspects and Applications Manteca, Aitor Gadea, Alejandra Van Assche, David Cossard, Pauline Gillard-Bocquet, Mélanie Beneyton, Thomas Innis, C. Axel Baret, Jean-Christophe ACS Synth Biol [Image: see text] The process of optimizing the properties of biological molecules is paramount for many industrial and medical applications. Directed evolution is a powerful technique for modifying and improving biomolecules such as proteins or nucleic acids (DNA or RNA). Mimicking the mechanism of natural evolution, one can enhance a desired property by applying a suitable selection pressure and sorting improved variants. Droplet-based microfluidic systems offer a high-throughput solution to this approach by helping to overcome the limiting screening steps and allowing the analysis of variants within increasingly complex libraries. Here, we review cases where successful evolution of biomolecules was achieved using droplet-based microfluidics, focusing on the molecular processes involved and the incorporation of microfluidics to the workflow. We highlight the advantages and limitations of these microfluidic systems compared to low-throughput methods and show how the integration of these systems into directed evolution workflows can open new avenues to discover or improve biomolecules according to user-defined conditions. American Chemical Society 2021-10-22 2021-11-19 /pmc/articles/PMC8609573/ /pubmed/34677942 http://dx.doi.org/10.1021/acssynbio.1c00313 Text en © 2021 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Manteca, Aitor
Gadea, Alejandra
Van Assche, David
Cossard, Pauline
Gillard-Bocquet, Mélanie
Beneyton, Thomas
Innis, C. Axel
Baret, Jean-Christophe
Directed Evolution in Drops: Molecular Aspects and Applications
title Directed Evolution in Drops: Molecular Aspects and Applications
title_full Directed Evolution in Drops: Molecular Aspects and Applications
title_fullStr Directed Evolution in Drops: Molecular Aspects and Applications
title_full_unstemmed Directed Evolution in Drops: Molecular Aspects and Applications
title_short Directed Evolution in Drops: Molecular Aspects and Applications
title_sort directed evolution in drops: molecular aspects and applications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609573/
https://www.ncbi.nlm.nih.gov/pubmed/34677942
http://dx.doi.org/10.1021/acssynbio.1c00313
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