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Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images

PURPOSE: In this study we aimed to leverage deep learning to develop a computer aided diagnosis (CAD) system toward helping radiologists in the diagnosis of SARS-CoV-2 virus syndrome on Lung ultrasonography (LUS). METHOD: A CAD system is developed based on a transfer learning of a residual network (...

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Autores principales: Shang, Shiyao, Huang, Chunwang, Yan, Wenxiao, Chen, Rumin, Cao, Jinglin, Zhang, Yukun, Guo, Yanhui, Du, Guoqing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier B.V. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609670/
https://www.ncbi.nlm.nih.gov/pubmed/34902668
http://dx.doi.org/10.1016/j.ejrad.2021.110066
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author Shang, Shiyao
Huang, Chunwang
Yan, Wenxiao
Chen, Rumin
Cao, Jinglin
Zhang, Yukun
Guo, Yanhui
Du, Guoqing
author_facet Shang, Shiyao
Huang, Chunwang
Yan, Wenxiao
Chen, Rumin
Cao, Jinglin
Zhang, Yukun
Guo, Yanhui
Du, Guoqing
author_sort Shang, Shiyao
collection PubMed
description PURPOSE: In this study we aimed to leverage deep learning to develop a computer aided diagnosis (CAD) system toward helping radiologists in the diagnosis of SARS-CoV-2 virus syndrome on Lung ultrasonography (LUS). METHOD: A CAD system is developed based on a transfer learning of a residual network (ResNet) to extract features on LUS and help radiologists to distinguish SARS-CoV-2 virus syndrome from healthy and non-SARS-CoV-2 pneumonia. A publicly available LUS dataset for SARS-CoV-2 virus syndrome consisting of 3909 images has been employed. Six radiologists with different experiences participated in the experiment. A comprehensive LUS data set was constructed and employed to train and verify the proposed method. Several metrics such as accuracy, recall, precision, and F1-score, are used to evaluate the performance of the proposed CAD approach. The performances of the radiologists with and without the help of CAD are also evaluated quantitively. The p-values of the t-test shows that with the help of the CAD system, both junior and senior radiologists significantly improve their diagnosis performance on both balanced and unbalanced datasets. RESULTS: Experimental results indicate the proposed CAD approach and the machine features from it can significantly improve the radiologists’ performance in the SARS-CoV-2 virus syndrome diagnosis. With the help of the proposed CAD system, the junior and senior radiologists achieved F1-score values of 91.33% and 95.79% on balanced dataset and 94.20% and 96.43% on unbalanced dataset. The proposed approach is verified on an independent test dataset and reports promising performance. CONCLUSIONS: The proposed CAD system reports promising performance in facilitating radiologists’ diagnosis SARS-CoV-2 virus syndrome and might assist the development of a fast, accessible screening method for pulmonary diseases.
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spelling pubmed-86096702021-11-23 Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images Shang, Shiyao Huang, Chunwang Yan, Wenxiao Chen, Rumin Cao, Jinglin Zhang, Yukun Guo, Yanhui Du, Guoqing Eur J Radiol Article PURPOSE: In this study we aimed to leverage deep learning to develop a computer aided diagnosis (CAD) system toward helping radiologists in the diagnosis of SARS-CoV-2 virus syndrome on Lung ultrasonography (LUS). METHOD: A CAD system is developed based on a transfer learning of a residual network (ResNet) to extract features on LUS and help radiologists to distinguish SARS-CoV-2 virus syndrome from healthy and non-SARS-CoV-2 pneumonia. A publicly available LUS dataset for SARS-CoV-2 virus syndrome consisting of 3909 images has been employed. Six radiologists with different experiences participated in the experiment. A comprehensive LUS data set was constructed and employed to train and verify the proposed method. Several metrics such as accuracy, recall, precision, and F1-score, are used to evaluate the performance of the proposed CAD approach. The performances of the radiologists with and without the help of CAD are also evaluated quantitively. The p-values of the t-test shows that with the help of the CAD system, both junior and senior radiologists significantly improve their diagnosis performance on both balanced and unbalanced datasets. RESULTS: Experimental results indicate the proposed CAD approach and the machine features from it can significantly improve the radiologists’ performance in the SARS-CoV-2 virus syndrome diagnosis. With the help of the proposed CAD system, the junior and senior radiologists achieved F1-score values of 91.33% and 95.79% on balanced dataset and 94.20% and 96.43% on unbalanced dataset. The proposed approach is verified on an independent test dataset and reports promising performance. CONCLUSIONS: The proposed CAD system reports promising performance in facilitating radiologists’ diagnosis SARS-CoV-2 virus syndrome and might assist the development of a fast, accessible screening method for pulmonary diseases. Elsevier B.V. 2022-01 2021-11-23 /pmc/articles/PMC8609670/ /pubmed/34902668 http://dx.doi.org/10.1016/j.ejrad.2021.110066 Text en © 2021 Elsevier B.V. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Shang, Shiyao
Huang, Chunwang
Yan, Wenxiao
Chen, Rumin
Cao, Jinglin
Zhang, Yukun
Guo, Yanhui
Du, Guoqing
Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images
title Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images
title_full Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images
title_fullStr Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images
title_full_unstemmed Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images
title_short Performance of a computer aided diagnosis system for SARS-CoV-2 pneumonia based on ultrasound images
title_sort performance of a computer aided diagnosis system for sars-cov-2 pneumonia based on ultrasound images
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609670/
https://www.ncbi.nlm.nih.gov/pubmed/34902668
http://dx.doi.org/10.1016/j.ejrad.2021.110066
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