Spliceator: multi-species splice site prediction using convolutional neural networks

BACKGROUND: Ab initio prediction of splice sites is an essential step in eukaryotic genome annotation. Recent predictors have exploited Deep Learning algorithms and reliable gene structures from model organisms. However, Deep Learning methods for non-model organisms are lacking. RESULTS: We develope...

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Detalles Bibliográficos
Autores principales: Scalzitti, Nicolas, Kress, Arnaud, Orhand, Romain, Weber, Thomas, Moulinier, Luc, Jeannin-Girardon, Anne, Collet, Pierre, Poch, Olivier, Thompson, Julie D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2021
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8609763/
https://www.ncbi.nlm.nih.gov/pubmed/34814826
http://dx.doi.org/10.1186/s12859-021-04471-3

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