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Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma

Esophageal squamous cell carcinoma (ESCC) is the most common and aggressive tumor worldwide, and the long-term survival of these patients remains poor. Three databases (GSE17351, GSE20347, and GSE100942) were obtained from Gene Expression Omnibus, and 193 differentially expressed genes including 56...

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Autores principales: Wang, Lingwei, Liu, Gang, Bolor-Erdene, Enkhbat, Li, Qinchuan, Mei, Yunqing, Zhou, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8610135/
https://www.ncbi.nlm.nih.gov/pubmed/34775374
http://dx.doi.org/10.18632/aging.203585
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author Wang, Lingwei
Liu, Gang
Bolor-Erdene, Enkhbat
Li, Qinchuan
Mei, Yunqing
Zhou, Lei
author_facet Wang, Lingwei
Liu, Gang
Bolor-Erdene, Enkhbat
Li, Qinchuan
Mei, Yunqing
Zhou, Lei
author_sort Wang, Lingwei
collection PubMed
description Esophageal squamous cell carcinoma (ESCC) is the most common and aggressive tumor worldwide, and the long-term survival of these patients remains poor. Three databases (GSE17351, GSE20347, and GSE100942) were obtained from Gene Expression Omnibus, and 193 differentially expressed genes including 56 upregulated and 137 downregulated genes were identified by paired test using limma R package. Then, functional enrichments by gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses showed these genes were mainly related protein digestion and absorption, and IL-17 signaling pathway. We then constructed a protein-protein interaction network and cytoHubba module to determine the six hub genes and overall survival analysis of the six hub genes were evaluated by UALCAN and GEPIA2 analysis. Ultimately, the experimental results confirmed the KIF4A was overexpressed in the ESCC tissues and cell lines compared with the normal esophageal mucosal tissues and was linked to poor prognosis. Moreover, we also revealed that KIF4A facilitates proliferation, cell cycle, migration, and invasion of ESCC in vivo and in vitro. Overall, these findings demonstrated that KIF4A could serve as diagnostic and prognostic biomarkers and may help facilitate therapeutic targets in ESCC patients.
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spelling pubmed-86101352021-11-24 Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma Wang, Lingwei Liu, Gang Bolor-Erdene, Enkhbat Li, Qinchuan Mei, Yunqing Zhou, Lei Aging (Albany NY) Research Paper Esophageal squamous cell carcinoma (ESCC) is the most common and aggressive tumor worldwide, and the long-term survival of these patients remains poor. Three databases (GSE17351, GSE20347, and GSE100942) were obtained from Gene Expression Omnibus, and 193 differentially expressed genes including 56 upregulated and 137 downregulated genes were identified by paired test using limma R package. Then, functional enrichments by gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses showed these genes were mainly related protein digestion and absorption, and IL-17 signaling pathway. We then constructed a protein-protein interaction network and cytoHubba module to determine the six hub genes and overall survival analysis of the six hub genes were evaluated by UALCAN and GEPIA2 analysis. Ultimately, the experimental results confirmed the KIF4A was overexpressed in the ESCC tissues and cell lines compared with the normal esophageal mucosal tissues and was linked to poor prognosis. Moreover, we also revealed that KIF4A facilitates proliferation, cell cycle, migration, and invasion of ESCC in vivo and in vitro. Overall, these findings demonstrated that KIF4A could serve as diagnostic and prognostic biomarkers and may help facilitate therapeutic targets in ESCC patients. Impact Journals 2021-11-14 /pmc/articles/PMC8610135/ /pubmed/34775374 http://dx.doi.org/10.18632/aging.203585 Text en Copyright: © 2021 Wang et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Wang, Lingwei
Liu, Gang
Bolor-Erdene, Enkhbat
Li, Qinchuan
Mei, Yunqing
Zhou, Lei
Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma
title Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma
title_full Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma
title_fullStr Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma
title_full_unstemmed Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma
title_short Identification of KIF4A as a prognostic biomarker for esophageal squamous cell carcinoma
title_sort identification of kif4a as a prognostic biomarker for esophageal squamous cell carcinoma
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8610135/
https://www.ncbi.nlm.nih.gov/pubmed/34775374
http://dx.doi.org/10.18632/aging.203585
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