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Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study
BACKGROUND: The implementation of novel techniques as a complement to traditional disease surveillance systems represents an additional opportunity for rapid analysis. OBJECTIVE: The objective of this work is to describe a web-based participatory surveillance strategy among health care workers (HCWs...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
JMIR Publications
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8610449/ https://www.ncbi.nlm.nih.gov/pubmed/34727046 http://dx.doi.org/10.2196/33576 |
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author | Leal-Neto, Onicio Egger, Thomas Schlegel, Matthias Flury, Domenica Sumer, Johannes Albrich, Werner Babouee Flury, Baharak Kuster, Stefan Vernazza, Pietro Kahlert, Christian Kohler, Philipp |
author_facet | Leal-Neto, Onicio Egger, Thomas Schlegel, Matthias Flury, Domenica Sumer, Johannes Albrich, Werner Babouee Flury, Baharak Kuster, Stefan Vernazza, Pietro Kahlert, Christian Kohler, Philipp |
author_sort | Leal-Neto, Onicio |
collection | PubMed |
description | BACKGROUND: The implementation of novel techniques as a complement to traditional disease surveillance systems represents an additional opportunity for rapid analysis. OBJECTIVE: The objective of this work is to describe a web-based participatory surveillance strategy among health care workers (HCWs) in two Swiss hospitals during the first wave of COVID-19. METHODS: A prospective cohort of HCWs was recruited in March 2020 at the Cantonal Hospital of St. Gallen and the Eastern Switzerland Children’s Hospital. For data analysis, we used a combination of the following techniques: locally estimated scatterplot smoothing (LOESS) regression, Spearman correlation, anomaly detection, and random forest. RESULTS: From March 23 to August 23, 2020, a total of 127,684 SMS text messages were sent, generating 90,414 valid reports among 1004 participants, achieving a weekly average of 4.5 (SD 1.9) reports per user. The symptom showing the strongest correlation with a positive polymerase chain reaction test result was loss of taste. Symptoms like red eyes or a runny nose were negatively associated with a positive test. The area under the receiver operating characteristic curve showed favorable performance of the classification tree, with an accuracy of 88% for the training data and 89% for the test data. Nevertheless, while the prediction matrix showed good specificity (80.0%), sensitivity was low (10.6%). CONCLUSIONS: Loss of taste was the symptom that was most aligned with COVID-19 activity at the population level. At the individual level—using machine learning–based random forest classification—reporting loss of taste and limb/muscle pain as well as the absence of runny nose and red eyes were the best predictors of COVID-19. |
format | Online Article Text |
id | pubmed-8610449 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | JMIR Publications |
record_format | MEDLINE/PubMed |
spelling | pubmed-86104492021-12-13 Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study Leal-Neto, Onicio Egger, Thomas Schlegel, Matthias Flury, Domenica Sumer, Johannes Albrich, Werner Babouee Flury, Baharak Kuster, Stefan Vernazza, Pietro Kahlert, Christian Kohler, Philipp JMIR Public Health Surveill Original Paper BACKGROUND: The implementation of novel techniques as a complement to traditional disease surveillance systems represents an additional opportunity for rapid analysis. OBJECTIVE: The objective of this work is to describe a web-based participatory surveillance strategy among health care workers (HCWs) in two Swiss hospitals during the first wave of COVID-19. METHODS: A prospective cohort of HCWs was recruited in March 2020 at the Cantonal Hospital of St. Gallen and the Eastern Switzerland Children’s Hospital. For data analysis, we used a combination of the following techniques: locally estimated scatterplot smoothing (LOESS) regression, Spearman correlation, anomaly detection, and random forest. RESULTS: From March 23 to August 23, 2020, a total of 127,684 SMS text messages were sent, generating 90,414 valid reports among 1004 participants, achieving a weekly average of 4.5 (SD 1.9) reports per user. The symptom showing the strongest correlation with a positive polymerase chain reaction test result was loss of taste. Symptoms like red eyes or a runny nose were negatively associated with a positive test. The area under the receiver operating characteristic curve showed favorable performance of the classification tree, with an accuracy of 88% for the training data and 89% for the test data. Nevertheless, while the prediction matrix showed good specificity (80.0%), sensitivity was low (10.6%). CONCLUSIONS: Loss of taste was the symptom that was most aligned with COVID-19 activity at the population level. At the individual level—using machine learning–based random forest classification—reporting loss of taste and limb/muscle pain as well as the absence of runny nose and red eyes were the best predictors of COVID-19. JMIR Publications 2021-11-22 /pmc/articles/PMC8610449/ /pubmed/34727046 http://dx.doi.org/10.2196/33576 Text en ©Onicio Leal-Neto, Thomas Egger, Matthias Schlegel, Domenica Flury, Johannes Sumer, Werner Albrich, Baharak Babouee Flury, Stefan Kuster, Pietro Vernazza, Christian Kahlert, Philipp Kohler. Originally published in JMIR Public Health and Surveillance (https://publichealth.jmir.org), 22.11.2021. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Public Health and Surveillance, is properly cited. The complete bibliographic information, a link to the original publication on https://publichealth.jmir.org, as well as this copyright and license information must be included. |
spellingShingle | Original Paper Leal-Neto, Onicio Egger, Thomas Schlegel, Matthias Flury, Domenica Sumer, Johannes Albrich, Werner Babouee Flury, Baharak Kuster, Stefan Vernazza, Pietro Kahlert, Christian Kohler, Philipp Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study |
title | Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study |
title_full | Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study |
title_fullStr | Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study |
title_full_unstemmed | Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study |
title_short | Digital SARS-CoV-2 Detection Among Hospital Employees: Participatory Surveillance Study |
title_sort | digital sars-cov-2 detection among hospital employees: participatory surveillance study |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8610449/ https://www.ncbi.nlm.nih.gov/pubmed/34727046 http://dx.doi.org/10.2196/33576 |
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