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Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients

PURPOSE: To identify likely pathogenic variants in three families with congenital cataracts via panel-based exome sequencing. METHODS: A panel containing 153 genes associated with congenital cataracts was designed. Genes were selected through reference to databases including the Human Gene Mutation...

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Autores principales: Chen, Doudou, Yang, Tao, Zhu, Siquan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8612798/
https://www.ncbi.nlm.nih.gov/pubmed/34840822
http://dx.doi.org/10.1155/2021/3847409
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author Chen, Doudou
Yang, Tao
Zhu, Siquan
author_facet Chen, Doudou
Yang, Tao
Zhu, Siquan
author_sort Chen, Doudou
collection PubMed
description PURPOSE: To identify likely pathogenic variants in three families with congenital cataracts via panel-based exome sequencing. METHODS: A panel containing 153 genes associated with congenital cataracts was designed. Genes were selected through reference to databases including the Human Gene Mutation Database (HGMD), Online Mendelian Inheritance in Man (OMIM), Genetic Home Reference, and the latest peer-reviewed publications on the genetics of hereditary cataracts. Panel-based exome sequencing was performed with the Illumina HiSeq X-Ten platform, and then the identified variants were confirmed with Sanger sequencing and evaluated according to the American College of Medical Genetics and Genomics (ACMG) criteria. RESULTS: Three likely pathogenic variants were found. A novel CRYBB2: c.230G > T p.G77V variant was identified in family A, a novel CRYBB2: c.230G > A p.G77D variant was identified in family B, and a novel CRYGD: c.475delG p.A159Pfs∗9 variant was identified in family C. CONCLUSION: Panel-based exome sequencing revealed three likely pathogenic variants in three unrelated Chinese families with congenital cataracts. These data expand the genetic spectrum associated with congenital cataracts.
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spelling pubmed-86127982021-11-25 Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients Chen, Doudou Yang, Tao Zhu, Siquan J Ophthalmol Research Article PURPOSE: To identify likely pathogenic variants in three families with congenital cataracts via panel-based exome sequencing. METHODS: A panel containing 153 genes associated with congenital cataracts was designed. Genes were selected through reference to databases including the Human Gene Mutation Database (HGMD), Online Mendelian Inheritance in Man (OMIM), Genetic Home Reference, and the latest peer-reviewed publications on the genetics of hereditary cataracts. Panel-based exome sequencing was performed with the Illumina HiSeq X-Ten platform, and then the identified variants were confirmed with Sanger sequencing and evaluated according to the American College of Medical Genetics and Genomics (ACMG) criteria. RESULTS: Three likely pathogenic variants were found. A novel CRYBB2: c.230G > T p.G77V variant was identified in family A, a novel CRYBB2: c.230G > A p.G77D variant was identified in family B, and a novel CRYGD: c.475delG p.A159Pfs∗9 variant was identified in family C. CONCLUSION: Panel-based exome sequencing revealed three likely pathogenic variants in three unrelated Chinese families with congenital cataracts. These data expand the genetic spectrum associated with congenital cataracts. Hindawi 2021-11-17 /pmc/articles/PMC8612798/ /pubmed/34840822 http://dx.doi.org/10.1155/2021/3847409 Text en Copyright © 2021 Doudou Chen et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Chen, Doudou
Yang, Tao
Zhu, Siquan
Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients
title Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients
title_full Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients
title_fullStr Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients
title_full_unstemmed Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients
title_short Novel Likely Pathogenic Variants Identified by Panel-Based Exome Sequencing in Congenital Cataract Patients
title_sort novel likely pathogenic variants identified by panel-based exome sequencing in congenital cataract patients
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8612798/
https://www.ncbi.nlm.nih.gov/pubmed/34840822
http://dx.doi.org/10.1155/2021/3847409
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