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Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125

SIMPLE SUMMARY: Contrary to traditional views, fossil bones have been shown to occasionally retain original cells, blood vessels, and structural tissues that are still comprised, in part, by their original proteins. To help clarify how such remarkable preservation occurs, we explored the fossilizati...

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Autores principales: Ullmann, Paul V., Macauley, Kyle, Ash, Richard D., Shoup, Ben, Scannella, John B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8614911/
https://www.ncbi.nlm.nih.gov/pubmed/34827186
http://dx.doi.org/10.3390/biology10111193
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author Ullmann, Paul V.
Macauley, Kyle
Ash, Richard D.
Shoup, Ben
Scannella, John B.
author_facet Ullmann, Paul V.
Macauley, Kyle
Ash, Richard D.
Shoup, Ben
Scannella, John B.
author_sort Ullmann, Paul V.
collection PubMed
description SIMPLE SUMMARY: Contrary to traditional views, fossil bones have been shown to occasionally retain original cells, blood vessels, and structural tissues that are still comprised, in part, by their original proteins. To help clarify how such remarkable preservation occurs, we explored the fossilization history of a famous Tyrannosaurus rex specimen previously shown to yield original cells, vessels, and collagen protein sequences. By analyzing the trace element composition of the femur of this tyrannosaur, we show that after death its carcass decayed underwater in a brackish, oxic, estuarine channel and then became buried by sands that quickly cemented around the bones, largely protecting them from further chemical alteration. Other bones yielding original proteins have also been found to have fossilized within rapidly-cementing sediments in oxidizing environments, which strongly suggests that such settings are conducive to molecular preservation. ABSTRACT: Many recent reports have demonstrated remarkable preservation of proteins in fossil bones dating back to the Permian. However, preservation mechanisms that foster the long-term stability of biomolecules and the taphonomic circumstances facilitating them remain largely unexplored. To address this, we examined the taphonomic and geochemical history of Tyrannosaurus rex specimen Museum of the Rockies (MOR) 1125, whose right femur and tibiae were previously shown to retain still-soft tissues and endogenous proteins. By combining taphonomic insights with trace element compositional data, we reconstruct the postmortem history of this famous specimen. Our data show that following prolonged, subaqueous decay in an estuarine channel, MOR 1125 was buried in a coarse sandstone wherein its bones fossilized while interacting with oxic and potentially brackish early-diagenetic groundwaters. Once its bones became stable fossils, they experienced minimal further chemical alteration. Comparisons with other recent studies reveal that oxidizing early-diagenetic microenvironments and diagenetic circumstances which restrict exposure to percolating pore fluids elevate biomolecular preservation potential by promoting molecular condensation reactions and hindering chemical alteration, respectively. Avoiding protracted interactions with late-diagenetic pore fluids is also likely crucial. Similar studies must be conducted on fossil bones preserved under diverse paleoenvironmental and diagenetic contexts to fully elucidate molecular preservation pathways.
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spelling pubmed-86149112021-11-26 Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125 Ullmann, Paul V. Macauley, Kyle Ash, Richard D. Shoup, Ben Scannella, John B. Biology (Basel) Article SIMPLE SUMMARY: Contrary to traditional views, fossil bones have been shown to occasionally retain original cells, blood vessels, and structural tissues that are still comprised, in part, by their original proteins. To help clarify how such remarkable preservation occurs, we explored the fossilization history of a famous Tyrannosaurus rex specimen previously shown to yield original cells, vessels, and collagen protein sequences. By analyzing the trace element composition of the femur of this tyrannosaur, we show that after death its carcass decayed underwater in a brackish, oxic, estuarine channel and then became buried by sands that quickly cemented around the bones, largely protecting them from further chemical alteration. Other bones yielding original proteins have also been found to have fossilized within rapidly-cementing sediments in oxidizing environments, which strongly suggests that such settings are conducive to molecular preservation. ABSTRACT: Many recent reports have demonstrated remarkable preservation of proteins in fossil bones dating back to the Permian. However, preservation mechanisms that foster the long-term stability of biomolecules and the taphonomic circumstances facilitating them remain largely unexplored. To address this, we examined the taphonomic and geochemical history of Tyrannosaurus rex specimen Museum of the Rockies (MOR) 1125, whose right femur and tibiae were previously shown to retain still-soft tissues and endogenous proteins. By combining taphonomic insights with trace element compositional data, we reconstruct the postmortem history of this famous specimen. Our data show that following prolonged, subaqueous decay in an estuarine channel, MOR 1125 was buried in a coarse sandstone wherein its bones fossilized while interacting with oxic and potentially brackish early-diagenetic groundwaters. Once its bones became stable fossils, they experienced minimal further chemical alteration. Comparisons with other recent studies reveal that oxidizing early-diagenetic microenvironments and diagenetic circumstances which restrict exposure to percolating pore fluids elevate biomolecular preservation potential by promoting molecular condensation reactions and hindering chemical alteration, respectively. Avoiding protracted interactions with late-diagenetic pore fluids is also likely crucial. Similar studies must be conducted on fossil bones preserved under diverse paleoenvironmental and diagenetic contexts to fully elucidate molecular preservation pathways. MDPI 2021-11-17 /pmc/articles/PMC8614911/ /pubmed/34827186 http://dx.doi.org/10.3390/biology10111193 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ullmann, Paul V.
Macauley, Kyle
Ash, Richard D.
Shoup, Ben
Scannella, John B.
Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125
title Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125
title_full Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125
title_fullStr Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125
title_full_unstemmed Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125
title_short Taphonomic and Diagenetic Pathways to Protein Preservation, Part I: The Case of Tyrannosaurus rex Specimen MOR 1125
title_sort taphonomic and diagenetic pathways to protein preservation, part i: the case of tyrannosaurus rex specimen mor 1125
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8614911/
https://www.ncbi.nlm.nih.gov/pubmed/34827186
http://dx.doi.org/10.3390/biology10111193
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