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Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients

Many virological tests have been implemented during the Coronavirus Disease 2019 (COVID-19) pandemic for diagnostic purposes, but they appear unsuitable for screening purposes. Furthermore, current screening strategies are not accurate enough to effectively curb the spread of the disease. Therefore,...

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Autores principales: Robotti, Carlo, Costantini, Giovanni, Saggio, Giovanni, Cesarini, Valerio, Calastri, Anna, Maiorano, Eugenia, Piloni, Davide, Perrone, Tiziano, Sabatini, Umberto, Ferretti, Virginia Valeria, Cassaniti, Irene, Baldanti, Fausto, Gravina, Andrea, Sakib, Ahmed, Alessi, Elena, Pietrantonio, Filomena, Pascucci, Matteo, Casali, Daniele, Zarezadeh, Zakarya, Zoppo, Vincenzo Del, Pisani, Antonio, Benazzo, Marco
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Voice Foundation. Published by Elsevier Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8616736/
https://www.ncbi.nlm.nih.gov/pubmed/34965907
http://dx.doi.org/10.1016/j.jvoice.2021.11.004
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author Robotti, Carlo
Costantini, Giovanni
Saggio, Giovanni
Cesarini, Valerio
Calastri, Anna
Maiorano, Eugenia
Piloni, Davide
Perrone, Tiziano
Sabatini, Umberto
Ferretti, Virginia Valeria
Cassaniti, Irene
Baldanti, Fausto
Gravina, Andrea
Sakib, Ahmed
Alessi, Elena
Pietrantonio, Filomena
Pascucci, Matteo
Casali, Daniele
Zarezadeh, Zakarya
Zoppo, Vincenzo Del
Pisani, Antonio
Benazzo, Marco
author_facet Robotti, Carlo
Costantini, Giovanni
Saggio, Giovanni
Cesarini, Valerio
Calastri, Anna
Maiorano, Eugenia
Piloni, Davide
Perrone, Tiziano
Sabatini, Umberto
Ferretti, Virginia Valeria
Cassaniti, Irene
Baldanti, Fausto
Gravina, Andrea
Sakib, Ahmed
Alessi, Elena
Pietrantonio, Filomena
Pascucci, Matteo
Casali, Daniele
Zarezadeh, Zakarya
Zoppo, Vincenzo Del
Pisani, Antonio
Benazzo, Marco
author_sort Robotti, Carlo
collection PubMed
description Many virological tests have been implemented during the Coronavirus Disease 2019 (COVID-19) pandemic for diagnostic purposes, but they appear unsuitable for screening purposes. Furthermore, current screening strategies are not accurate enough to effectively curb the spread of the disease. Therefore, the present study was conducted within a controlled clinical environment to determine eventual detectable variations in the voice of COVID-19 patients, recovered and healthy subjects, and also to determine whether machine learning-based voice assessment (MLVA) can accurately discriminate between them, thus potentially serving as a more effective mass-screening tool. Three different subpopulations were consecutively recruited: positive COVID-19 patients, recovered COVID-19 patients and healthy individuals as controls. Positive patients were recruited within 10 days from nasal swab positivity. Recovery from COVID-19 was established clinically, virologically and radiologically. Healthy individuals reported no COVID-19 symptoms and yielded negative results at serological testing. All study participants provided three trials for multiple vocal tasks (sustained vowel phonation, speech, cough). All recordings were initially divided into three different binary classifications with a feature selection, ranking and cross-validated RBF-SVM pipeline. This brough a mean accuracy of 90.24%, a mean sensitivity of 91.15%, a mean specificity of 89.13% and a mean AUC of 0.94 across all tasks and all comparisons, and outlined the sustained vowel as the most effective vocal task for COVID discrimination. Moreover, a three-way classification was carried out on an external test set comprised of 30 subjects, 10 per class, with a mean accuracy of 80% and an accuracy of 100% for the detection of positive subjects. Within this assessment, recovered individuals proved to be the most difficult class to identify, and all the misclassified subjects were declared positive; this might be related to mid and short-term vocal traces of COVID-19, even after the clinical resolution of the infection. In conclusion, MLVA may accurately discriminate between positive COVID-19 patients, recovered COVID-19 patients and healthy individuals. Further studies should test MLVA among larger populations and asymptomatic positive COVID-19 patients to validate this novel screening technology and test its potential application as a potentially more effective surveillance strategy for COVID-19.
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spelling pubmed-86167362021-11-26 Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients Robotti, Carlo Costantini, Giovanni Saggio, Giovanni Cesarini, Valerio Calastri, Anna Maiorano, Eugenia Piloni, Davide Perrone, Tiziano Sabatini, Umberto Ferretti, Virginia Valeria Cassaniti, Irene Baldanti, Fausto Gravina, Andrea Sakib, Ahmed Alessi, Elena Pietrantonio, Filomena Pascucci, Matteo Casali, Daniele Zarezadeh, Zakarya Zoppo, Vincenzo Del Pisani, Antonio Benazzo, Marco J Voice Article Many virological tests have been implemented during the Coronavirus Disease 2019 (COVID-19) pandemic for diagnostic purposes, but they appear unsuitable for screening purposes. Furthermore, current screening strategies are not accurate enough to effectively curb the spread of the disease. Therefore, the present study was conducted within a controlled clinical environment to determine eventual detectable variations in the voice of COVID-19 patients, recovered and healthy subjects, and also to determine whether machine learning-based voice assessment (MLVA) can accurately discriminate between them, thus potentially serving as a more effective mass-screening tool. Three different subpopulations were consecutively recruited: positive COVID-19 patients, recovered COVID-19 patients and healthy individuals as controls. Positive patients were recruited within 10 days from nasal swab positivity. Recovery from COVID-19 was established clinically, virologically and radiologically. Healthy individuals reported no COVID-19 symptoms and yielded negative results at serological testing. All study participants provided three trials for multiple vocal tasks (sustained vowel phonation, speech, cough). All recordings were initially divided into three different binary classifications with a feature selection, ranking and cross-validated RBF-SVM pipeline. This brough a mean accuracy of 90.24%, a mean sensitivity of 91.15%, a mean specificity of 89.13% and a mean AUC of 0.94 across all tasks and all comparisons, and outlined the sustained vowel as the most effective vocal task for COVID discrimination. Moreover, a three-way classification was carried out on an external test set comprised of 30 subjects, 10 per class, with a mean accuracy of 80% and an accuracy of 100% for the detection of positive subjects. Within this assessment, recovered individuals proved to be the most difficult class to identify, and all the misclassified subjects were declared positive; this might be related to mid and short-term vocal traces of COVID-19, even after the clinical resolution of the infection. In conclusion, MLVA may accurately discriminate between positive COVID-19 patients, recovered COVID-19 patients and healthy individuals. Further studies should test MLVA among larger populations and asymptomatic positive COVID-19 patients to validate this novel screening technology and test its potential application as a potentially more effective surveillance strategy for COVID-19. The Voice Foundation. Published by Elsevier Inc. 2021-11-26 /pmc/articles/PMC8616736/ /pubmed/34965907 http://dx.doi.org/10.1016/j.jvoice.2021.11.004 Text en © 2021 The Voice Foundation. Published by Elsevier Inc. All rights reserved. Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Robotti, Carlo
Costantini, Giovanni
Saggio, Giovanni
Cesarini, Valerio
Calastri, Anna
Maiorano, Eugenia
Piloni, Davide
Perrone, Tiziano
Sabatini, Umberto
Ferretti, Virginia Valeria
Cassaniti, Irene
Baldanti, Fausto
Gravina, Andrea
Sakib, Ahmed
Alessi, Elena
Pietrantonio, Filomena
Pascucci, Matteo
Casali, Daniele
Zarezadeh, Zakarya
Zoppo, Vincenzo Del
Pisani, Antonio
Benazzo, Marco
Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients
title Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients
title_full Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients
title_fullStr Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients
title_full_unstemmed Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients
title_short Machine Learning-based Voice Assessment for the Detection of Positive and Recovered COVID-19 Patients
title_sort machine learning-based voice assessment for the detection of positive and recovered covid-19 patients
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8616736/
https://www.ncbi.nlm.nih.gov/pubmed/34965907
http://dx.doi.org/10.1016/j.jvoice.2021.11.004
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