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Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening

The activity of nanomaterials (NMs) in catalytically scavenging superoxide anions mimics that of superoxide dismutase (SOD). Although dozens of NMs have been demonstrated to possess such activity, the underlying principles are unclear, hindering the discovery of NMs as the novel SOD mimics. In this...

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Autores principales: Wang, Zhenzhen, Wu, Jiangjiexing, Zheng, Jia-Jia, Shen, Xiaomei, Yan, Liang, Wei, Hui, Gao, Xingfa, Zhao, Yuliang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8616946/
https://www.ncbi.nlm.nih.gov/pubmed/34824234
http://dx.doi.org/10.1038/s41467-021-27194-8
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author Wang, Zhenzhen
Wu, Jiangjiexing
Zheng, Jia-Jia
Shen, Xiaomei
Yan, Liang
Wei, Hui
Gao, Xingfa
Zhao, Yuliang
author_facet Wang, Zhenzhen
Wu, Jiangjiexing
Zheng, Jia-Jia
Shen, Xiaomei
Yan, Liang
Wei, Hui
Gao, Xingfa
Zhao, Yuliang
author_sort Wang, Zhenzhen
collection PubMed
description The activity of nanomaterials (NMs) in catalytically scavenging superoxide anions mimics that of superoxide dismutase (SOD). Although dozens of NMs have been demonstrated to possess such activity, the underlying principles are unclear, hindering the discovery of NMs as the novel SOD mimics. In this work, we use density functional theory calculations to study the thermodynamics and kinetics of the catalytic processes, and we develop two principles, namely, an energy level principle and an adsorption energy principle, for the activity. The first principle quantitatively describes the role of the intermediate frontier molecular orbital in transferring electrons for catalysis. The second one quantitatively describes the competition between the desired catalytic reaction and undesired side reactions. The ability of the principles to predict the SOD-like activities of metal-organic frameworks were verified by experiments. Both principles can be easily implemented in computer programs to computationally screen NMs with the intrinsic SOD-like activity.
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spelling pubmed-86169462021-12-01 Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening Wang, Zhenzhen Wu, Jiangjiexing Zheng, Jia-Jia Shen, Xiaomei Yan, Liang Wei, Hui Gao, Xingfa Zhao, Yuliang Nat Commun Article The activity of nanomaterials (NMs) in catalytically scavenging superoxide anions mimics that of superoxide dismutase (SOD). Although dozens of NMs have been demonstrated to possess such activity, the underlying principles are unclear, hindering the discovery of NMs as the novel SOD mimics. In this work, we use density functional theory calculations to study the thermodynamics and kinetics of the catalytic processes, and we develop two principles, namely, an energy level principle and an adsorption energy principle, for the activity. The first principle quantitatively describes the role of the intermediate frontier molecular orbital in transferring electrons for catalysis. The second one quantitatively describes the competition between the desired catalytic reaction and undesired side reactions. The ability of the principles to predict the SOD-like activities of metal-organic frameworks were verified by experiments. Both principles can be easily implemented in computer programs to computationally screen NMs with the intrinsic SOD-like activity. Nature Publishing Group UK 2021-11-25 /pmc/articles/PMC8616946/ /pubmed/34824234 http://dx.doi.org/10.1038/s41467-021-27194-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wang, Zhenzhen
Wu, Jiangjiexing
Zheng, Jia-Jia
Shen, Xiaomei
Yan, Liang
Wei, Hui
Gao, Xingfa
Zhao, Yuliang
Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
title Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
title_full Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
title_fullStr Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
title_full_unstemmed Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
title_short Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
title_sort accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8616946/
https://www.ncbi.nlm.nih.gov/pubmed/34824234
http://dx.doi.org/10.1038/s41467-021-27194-8
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