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Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR

Since its first detection in 1979, dengue fever has been considered a major public health issue in the Lao People’s Democratic Republic (PDR). Dengue virus (DENV) serotype 1 was the cause of an epidemic in 2010–2011. Between 2012 and 2020, major outbreaks due successively to DENV-3, DENV-4 and recen...

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Autores principales: Calvez, Elodie, Bounmany, Phaithong, Balière, Charlotte, Somlor, Somphavanh, Viengphouthong, Souksakhone, Xaybounsou, Thonglakhone, Keosenhom, Sitsana, Fangkham, Kitphithak, Brey, Paul T., Caro, Valérie, Lacoste, Vincent, Grandadam, Marc
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8617722/
https://www.ncbi.nlm.nih.gov/pubmed/34835389
http://dx.doi.org/10.3390/microorganisms9112263
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author Calvez, Elodie
Bounmany, Phaithong
Balière, Charlotte
Somlor, Somphavanh
Viengphouthong, Souksakhone
Xaybounsou, Thonglakhone
Keosenhom, Sitsana
Fangkham, Kitphithak
Brey, Paul T.
Caro, Valérie
Lacoste, Vincent
Grandadam, Marc
author_facet Calvez, Elodie
Bounmany, Phaithong
Balière, Charlotte
Somlor, Somphavanh
Viengphouthong, Souksakhone
Xaybounsou, Thonglakhone
Keosenhom, Sitsana
Fangkham, Kitphithak
Brey, Paul T.
Caro, Valérie
Lacoste, Vincent
Grandadam, Marc
author_sort Calvez, Elodie
collection PubMed
description Since its first detection in 1979, dengue fever has been considered a major public health issue in the Lao People’s Democratic Republic (PDR). Dengue virus (DENV) serotype 1 was the cause of an epidemic in 2010–2011. Between 2012 and 2020, major outbreaks due successively to DENV-3, DENV-4 and recently DENV-2 have been recorded. However, DENV-1 still co-circulated in the country over this period. Here, we summarize epidemiological and molecular data of DENV-1 between 2016 and 2020 in the Lao PDR. Our data highlight the continuous circulation of DENV-1 in the country at levels ranging from 16% to 22% among serotyping tests. In addition, the phylogenetic analysis has revealed the circulation of DENV-1 genotype I at least since 2008 with a co-circulation of different clusters. Sequence data support independent DENV-1 introductions in the Lao PDR correlated with an active circulation of this serotype at the regional level in Southeast Asia. The maintenance of DENV-1 circulation over the last ten years supports a low level of immunity against this serotype within the Lao population. Thereby, the risk of a DENV-1 epidemic cannot be ruled out in the future, and this emphasizes the importance of maintaining an integrated surveillance approach to prevent major outbreaks.
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spelling pubmed-86177222021-11-27 Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR Calvez, Elodie Bounmany, Phaithong Balière, Charlotte Somlor, Somphavanh Viengphouthong, Souksakhone Xaybounsou, Thonglakhone Keosenhom, Sitsana Fangkham, Kitphithak Brey, Paul T. Caro, Valérie Lacoste, Vincent Grandadam, Marc Microorganisms Article Since its first detection in 1979, dengue fever has been considered a major public health issue in the Lao People’s Democratic Republic (PDR). Dengue virus (DENV) serotype 1 was the cause of an epidemic in 2010–2011. Between 2012 and 2020, major outbreaks due successively to DENV-3, DENV-4 and recently DENV-2 have been recorded. However, DENV-1 still co-circulated in the country over this period. Here, we summarize epidemiological and molecular data of DENV-1 between 2016 and 2020 in the Lao PDR. Our data highlight the continuous circulation of DENV-1 in the country at levels ranging from 16% to 22% among serotyping tests. In addition, the phylogenetic analysis has revealed the circulation of DENV-1 genotype I at least since 2008 with a co-circulation of different clusters. Sequence data support independent DENV-1 introductions in the Lao PDR correlated with an active circulation of this serotype at the regional level in Southeast Asia. The maintenance of DENV-1 circulation over the last ten years supports a low level of immunity against this serotype within the Lao population. Thereby, the risk of a DENV-1 epidemic cannot be ruled out in the future, and this emphasizes the importance of maintaining an integrated surveillance approach to prevent major outbreaks. MDPI 2021-10-30 /pmc/articles/PMC8617722/ /pubmed/34835389 http://dx.doi.org/10.3390/microorganisms9112263 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Calvez, Elodie
Bounmany, Phaithong
Balière, Charlotte
Somlor, Somphavanh
Viengphouthong, Souksakhone
Xaybounsou, Thonglakhone
Keosenhom, Sitsana
Fangkham, Kitphithak
Brey, Paul T.
Caro, Valérie
Lacoste, Vincent
Grandadam, Marc
Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR
title Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR
title_full Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR
title_fullStr Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR
title_full_unstemmed Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR
title_short Using Background Sequencing Data to Anticipate DENV-1 Circulation in the Lao PDR
title_sort using background sequencing data to anticipate denv-1 circulation in the lao pdr
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8617722/
https://www.ncbi.nlm.nih.gov/pubmed/34835389
http://dx.doi.org/10.3390/microorganisms9112263
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