Cargando…

Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning

It is desirable to combine the expressive power of deep learning with Gaussian Process (GP) in one expressive Bayesian learning model. Deep kernel learning showed success as a deep network used for feature extraction. Then, a GP was used as the function model. Recently, it was suggested that, albeit...

Descripción completa

Detalles Bibliográficos
Autores principales: Lu, Chi-Ken, Shafto, Patrick
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618322/
https://www.ncbi.nlm.nih.gov/pubmed/34828085
http://dx.doi.org/10.3390/e23111387
_version_ 1784604719630516224
author Lu, Chi-Ken
Shafto, Patrick
author_facet Lu, Chi-Ken
Shafto, Patrick
author_sort Lu, Chi-Ken
collection PubMed
description It is desirable to combine the expressive power of deep learning with Gaussian Process (GP) in one expressive Bayesian learning model. Deep kernel learning showed success as a deep network used for feature extraction. Then, a GP was used as the function model. Recently, it was suggested that, albeit training with marginal likelihood, the deterministic nature of a feature extractor might lead to overfitting, and replacement with a Bayesian network seemed to cure it. Here, we propose the conditional deep Gaussian process (DGP) in which the intermediate GPs in hierarchical composition are supported by the hyperdata and the exposed GP remains zero mean. Motivated by the inducing points in sparse GP, the hyperdata also play the role of function supports, but are hyperparameters rather than random variables. It follows our previous moment matching approach to approximate the marginal prior for conditional DGP with a GP carrying an effective kernel. Thus, as in empirical Bayes, the hyperdata are learned by optimizing the approximate marginal likelihood which implicitly depends on the hyperdata via the kernel. We show the equivalence with the deep kernel learning in the limit of dense hyperdata in latent space. However, the conditional DGP and the corresponding approximate inference enjoy the benefit of being more Bayesian than deep kernel learning. Preliminary extrapolation results demonstrate expressive power from the depth of hierarchy by exploiting the exact covariance and hyperdata learning, in comparison with GP kernel composition, DGP variational inference and deep kernel learning. We also address the non-Gaussian aspect of our model as well as way of upgrading to a full Bayes inference.
format Online
Article
Text
id pubmed-8618322
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-86183222021-11-27 Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning Lu, Chi-Ken Shafto, Patrick Entropy (Basel) Article It is desirable to combine the expressive power of deep learning with Gaussian Process (GP) in one expressive Bayesian learning model. Deep kernel learning showed success as a deep network used for feature extraction. Then, a GP was used as the function model. Recently, it was suggested that, albeit training with marginal likelihood, the deterministic nature of a feature extractor might lead to overfitting, and replacement with a Bayesian network seemed to cure it. Here, we propose the conditional deep Gaussian process (DGP) in which the intermediate GPs in hierarchical composition are supported by the hyperdata and the exposed GP remains zero mean. Motivated by the inducing points in sparse GP, the hyperdata also play the role of function supports, but are hyperparameters rather than random variables. It follows our previous moment matching approach to approximate the marginal prior for conditional DGP with a GP carrying an effective kernel. Thus, as in empirical Bayes, the hyperdata are learned by optimizing the approximate marginal likelihood which implicitly depends on the hyperdata via the kernel. We show the equivalence with the deep kernel learning in the limit of dense hyperdata in latent space. However, the conditional DGP and the corresponding approximate inference enjoy the benefit of being more Bayesian than deep kernel learning. Preliminary extrapolation results demonstrate expressive power from the depth of hierarchy by exploiting the exact covariance and hyperdata learning, in comparison with GP kernel composition, DGP variational inference and deep kernel learning. We also address the non-Gaussian aspect of our model as well as way of upgrading to a full Bayes inference. MDPI 2021-10-23 /pmc/articles/PMC8618322/ /pubmed/34828085 http://dx.doi.org/10.3390/e23111387 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lu, Chi-Ken
Shafto, Patrick
Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning
title Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning
title_full Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning
title_fullStr Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning
title_full_unstemmed Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning
title_short Conditional Deep Gaussian Processes: Empirical Bayes Hyperdata Learning
title_sort conditional deep gaussian processes: empirical bayes hyperdata learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618322/
https://www.ncbi.nlm.nih.gov/pubmed/34828085
http://dx.doi.org/10.3390/e23111387
work_keys_str_mv AT luchiken conditionaldeepgaussianprocessesempiricalbayeshyperdatalearning
AT shaftopatrick conditionaldeepgaussianprocessesempiricalbayeshyperdatalearning