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Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
High spatio-angular resolution diffusion MRI (dMRI) has been shown to provide accurate identification of complex neuronal fiber configurations, albeit, at the cost of long acquisition times. We propose a method to recover intra-voxel fiber configurations at high spatio-angular resolution relying on...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618762/ https://www.ncbi.nlm.nih.gov/pubmed/34821857 http://dx.doi.org/10.3390/jimaging7110226 |
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author | Pesce, Marica Repetti, Audrey Auría, Anna Daducci, Alessandro Thiran, Jean-Philippe Wiaux, Yves |
author_facet | Pesce, Marica Repetti, Audrey Auría, Anna Daducci, Alessandro Thiran, Jean-Philippe Wiaux, Yves |
author_sort | Pesce, Marica |
collection | PubMed |
description | High spatio-angular resolution diffusion MRI (dMRI) has been shown to provide accurate identification of complex neuronal fiber configurations, albeit, at the cost of long acquisition times. We propose a method to recover intra-voxel fiber configurations at high spatio-angular resolution relying on a 3D kq-space under-sampling scheme to enable accelerated acquisitions. The inverse problem for the reconstruction of the fiber orientation distribution (FOD) is regularized by a structured sparsity prior promoting simultaneously voxel-wise sparsity and spatial smoothness of fiber orientation. Prior knowledge of the spatial distribution of white matter, gray matter, and cerebrospinal fluid is also leveraged. A minimization problem is formulated and solved via a stochastic forward–backward algorithm. Simulations and real data analysis suggest that accurate FOD mapping can be achieved from severe kq-space under-sampling regimes potentially enabling high spatio-angular resolution dMRI in the clinical setting. |
format | Online Article Text |
id | pubmed-8618762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86187622021-11-27 Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors Pesce, Marica Repetti, Audrey Auría, Anna Daducci, Alessandro Thiran, Jean-Philippe Wiaux, Yves J Imaging Article High spatio-angular resolution diffusion MRI (dMRI) has been shown to provide accurate identification of complex neuronal fiber configurations, albeit, at the cost of long acquisition times. We propose a method to recover intra-voxel fiber configurations at high spatio-angular resolution relying on a 3D kq-space under-sampling scheme to enable accelerated acquisitions. The inverse problem for the reconstruction of the fiber orientation distribution (FOD) is regularized by a structured sparsity prior promoting simultaneously voxel-wise sparsity and spatial smoothness of fiber orientation. Prior knowledge of the spatial distribution of white matter, gray matter, and cerebrospinal fluid is also leveraged. A minimization problem is formulated and solved via a stochastic forward–backward algorithm. Simulations and real data analysis suggest that accurate FOD mapping can be achieved from severe kq-space under-sampling regimes potentially enabling high spatio-angular resolution dMRI in the clinical setting. MDPI 2021-10-27 /pmc/articles/PMC8618762/ /pubmed/34821857 http://dx.doi.org/10.3390/jimaging7110226 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Pesce, Marica Repetti, Audrey Auría, Anna Daducci, Alessandro Thiran, Jean-Philippe Wiaux, Yves Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors |
title | Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors |
title_full | Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors |
title_fullStr | Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors |
title_full_unstemmed | Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors |
title_short | Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors |
title_sort | fast fiber orientation estimation in diffusion mri from kq-space sampling and anatomical priors |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618762/ https://www.ncbi.nlm.nih.gov/pubmed/34821857 http://dx.doi.org/10.3390/jimaging7110226 |
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