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Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors

High spatio-angular resolution diffusion MRI (dMRI) has been shown to provide accurate identification of complex neuronal fiber configurations, albeit, at the cost of long acquisition times. We propose a method to recover intra-voxel fiber configurations at high spatio-angular resolution relying on...

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Detalles Bibliográficos
Autores principales: Pesce, Marica, Repetti, Audrey, Auría, Anna, Daducci, Alessandro, Thiran, Jean-Philippe, Wiaux, Yves
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618762/
https://www.ncbi.nlm.nih.gov/pubmed/34821857
http://dx.doi.org/10.3390/jimaging7110226
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author Pesce, Marica
Repetti, Audrey
Auría, Anna
Daducci, Alessandro
Thiran, Jean-Philippe
Wiaux, Yves
author_facet Pesce, Marica
Repetti, Audrey
Auría, Anna
Daducci, Alessandro
Thiran, Jean-Philippe
Wiaux, Yves
author_sort Pesce, Marica
collection PubMed
description High spatio-angular resolution diffusion MRI (dMRI) has been shown to provide accurate identification of complex neuronal fiber configurations, albeit, at the cost of long acquisition times. We propose a method to recover intra-voxel fiber configurations at high spatio-angular resolution relying on a 3D kq-space under-sampling scheme to enable accelerated acquisitions. The inverse problem for the reconstruction of the fiber orientation distribution (FOD) is regularized by a structured sparsity prior promoting simultaneously voxel-wise sparsity and spatial smoothness of fiber orientation. Prior knowledge of the spatial distribution of white matter, gray matter, and cerebrospinal fluid is also leveraged. A minimization problem is formulated and solved via a stochastic forward–backward algorithm. Simulations and real data analysis suggest that accurate FOD mapping can be achieved from severe kq-space under-sampling regimes potentially enabling high spatio-angular resolution dMRI in the clinical setting.
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spelling pubmed-86187622021-11-27 Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors Pesce, Marica Repetti, Audrey Auría, Anna Daducci, Alessandro Thiran, Jean-Philippe Wiaux, Yves J Imaging Article High spatio-angular resolution diffusion MRI (dMRI) has been shown to provide accurate identification of complex neuronal fiber configurations, albeit, at the cost of long acquisition times. We propose a method to recover intra-voxel fiber configurations at high spatio-angular resolution relying on a 3D kq-space under-sampling scheme to enable accelerated acquisitions. The inverse problem for the reconstruction of the fiber orientation distribution (FOD) is regularized by a structured sparsity prior promoting simultaneously voxel-wise sparsity and spatial smoothness of fiber orientation. Prior knowledge of the spatial distribution of white matter, gray matter, and cerebrospinal fluid is also leveraged. A minimization problem is formulated and solved via a stochastic forward–backward algorithm. Simulations and real data analysis suggest that accurate FOD mapping can be achieved from severe kq-space under-sampling regimes potentially enabling high spatio-angular resolution dMRI in the clinical setting. MDPI 2021-10-27 /pmc/articles/PMC8618762/ /pubmed/34821857 http://dx.doi.org/10.3390/jimaging7110226 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pesce, Marica
Repetti, Audrey
Auría, Anna
Daducci, Alessandro
Thiran, Jean-Philippe
Wiaux, Yves
Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
title Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
title_full Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
title_fullStr Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
title_full_unstemmed Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
title_short Fast Fiber Orientation Estimation in Diffusion MRI from kq-Space Sampling and Anatomical Priors
title_sort fast fiber orientation estimation in diffusion mri from kq-space sampling and anatomical priors
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618762/
https://www.ncbi.nlm.nih.gov/pubmed/34821857
http://dx.doi.org/10.3390/jimaging7110226
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