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Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study

Background: Ex vivo fluorescent confocal microscopy (FCM) is a novel and effective method for a fast-automatized histological tissue examination. In contrast, conventional diagnostic methods are primarily based on the skills of the histopathologist. In this study, we investigated the potential of co...

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Autores principales: Shavlokhova, Veronika, Sandhu, Sameena, Flechtenmacher, Christa, Koveshazi, Istvan, Neumeier, Florian, Padrón-Laso, Víctor, Jonke, Žan, Saravi, Babak, Vollmer, Michael, Vollmer, Andreas, Hoffmann, Jürgen, Engel, Michael, Ristow, Oliver, Freudlsperger, Christian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618824/
https://www.ncbi.nlm.nih.gov/pubmed/34830608
http://dx.doi.org/10.3390/jcm10225326
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author Shavlokhova, Veronika
Sandhu, Sameena
Flechtenmacher, Christa
Koveshazi, Istvan
Neumeier, Florian
Padrón-Laso, Víctor
Jonke, Žan
Saravi, Babak
Vollmer, Michael
Vollmer, Andreas
Hoffmann, Jürgen
Engel, Michael
Ristow, Oliver
Freudlsperger, Christian
author_facet Shavlokhova, Veronika
Sandhu, Sameena
Flechtenmacher, Christa
Koveshazi, Istvan
Neumeier, Florian
Padrón-Laso, Víctor
Jonke, Žan
Saravi, Babak
Vollmer, Michael
Vollmer, Andreas
Hoffmann, Jürgen
Engel, Michael
Ristow, Oliver
Freudlsperger, Christian
author_sort Shavlokhova, Veronika
collection PubMed
description Background: Ex vivo fluorescent confocal microscopy (FCM) is a novel and effective method for a fast-automatized histological tissue examination. In contrast, conventional diagnostic methods are primarily based on the skills of the histopathologist. In this study, we investigated the potential of convolutional neural networks (CNNs) for automatized classification of oral squamous cell carcinoma via ex vivo FCM imaging for the first time. Material and Methods: Tissue samples from 20 patients were collected, scanned with an ex vivo confocal microscope immediately after resection, and investigated histopathologically. A CNN architecture (MobileNet) was trained and tested for accuracy. Results: The model achieved a sensitivity of 0.47 and specificity of 0.96 in the automated classification of cancerous tissue in our study. Conclusion: In this preliminary work, we trained a CNN model on a limited number of ex vivo FCM images and obtained promising results in the automated classification of cancerous tissue. Further studies using large sample sizes are warranted to introduce this technology into clinics.
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spelling pubmed-86188242021-11-27 Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study Shavlokhova, Veronika Sandhu, Sameena Flechtenmacher, Christa Koveshazi, Istvan Neumeier, Florian Padrón-Laso, Víctor Jonke, Žan Saravi, Babak Vollmer, Michael Vollmer, Andreas Hoffmann, Jürgen Engel, Michael Ristow, Oliver Freudlsperger, Christian J Clin Med Article Background: Ex vivo fluorescent confocal microscopy (FCM) is a novel and effective method for a fast-automatized histological tissue examination. In contrast, conventional diagnostic methods are primarily based on the skills of the histopathologist. In this study, we investigated the potential of convolutional neural networks (CNNs) for automatized classification of oral squamous cell carcinoma via ex vivo FCM imaging for the first time. Material and Methods: Tissue samples from 20 patients were collected, scanned with an ex vivo confocal microscope immediately after resection, and investigated histopathologically. A CNN architecture (MobileNet) was trained and tested for accuracy. Results: The model achieved a sensitivity of 0.47 and specificity of 0.96 in the automated classification of cancerous tissue in our study. Conclusion: In this preliminary work, we trained a CNN model on a limited number of ex vivo FCM images and obtained promising results in the automated classification of cancerous tissue. Further studies using large sample sizes are warranted to introduce this technology into clinics. MDPI 2021-11-16 /pmc/articles/PMC8618824/ /pubmed/34830608 http://dx.doi.org/10.3390/jcm10225326 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shavlokhova, Veronika
Sandhu, Sameena
Flechtenmacher, Christa
Koveshazi, Istvan
Neumeier, Florian
Padrón-Laso, Víctor
Jonke, Žan
Saravi, Babak
Vollmer, Michael
Vollmer, Andreas
Hoffmann, Jürgen
Engel, Michael
Ristow, Oliver
Freudlsperger, Christian
Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
title Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
title_full Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
title_fullStr Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
title_full_unstemmed Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
title_short Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
title_sort deep learning on oral squamous cell carcinoma ex vivo fluorescent confocal microscopy data: a feasibility study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618824/
https://www.ncbi.nlm.nih.gov/pubmed/34830608
http://dx.doi.org/10.3390/jcm10225326
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