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Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study
Background: Ex vivo fluorescent confocal microscopy (FCM) is a novel and effective method for a fast-automatized histological tissue examination. In contrast, conventional diagnostic methods are primarily based on the skills of the histopathologist. In this study, we investigated the potential of co...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618824/ https://www.ncbi.nlm.nih.gov/pubmed/34830608 http://dx.doi.org/10.3390/jcm10225326 |
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author | Shavlokhova, Veronika Sandhu, Sameena Flechtenmacher, Christa Koveshazi, Istvan Neumeier, Florian Padrón-Laso, Víctor Jonke, Žan Saravi, Babak Vollmer, Michael Vollmer, Andreas Hoffmann, Jürgen Engel, Michael Ristow, Oliver Freudlsperger, Christian |
author_facet | Shavlokhova, Veronika Sandhu, Sameena Flechtenmacher, Christa Koveshazi, Istvan Neumeier, Florian Padrón-Laso, Víctor Jonke, Žan Saravi, Babak Vollmer, Michael Vollmer, Andreas Hoffmann, Jürgen Engel, Michael Ristow, Oliver Freudlsperger, Christian |
author_sort | Shavlokhova, Veronika |
collection | PubMed |
description | Background: Ex vivo fluorescent confocal microscopy (FCM) is a novel and effective method for a fast-automatized histological tissue examination. In contrast, conventional diagnostic methods are primarily based on the skills of the histopathologist. In this study, we investigated the potential of convolutional neural networks (CNNs) for automatized classification of oral squamous cell carcinoma via ex vivo FCM imaging for the first time. Material and Methods: Tissue samples from 20 patients were collected, scanned with an ex vivo confocal microscope immediately after resection, and investigated histopathologically. A CNN architecture (MobileNet) was trained and tested for accuracy. Results: The model achieved a sensitivity of 0.47 and specificity of 0.96 in the automated classification of cancerous tissue in our study. Conclusion: In this preliminary work, we trained a CNN model on a limited number of ex vivo FCM images and obtained promising results in the automated classification of cancerous tissue. Further studies using large sample sizes are warranted to introduce this technology into clinics. |
format | Online Article Text |
id | pubmed-8618824 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86188242021-11-27 Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study Shavlokhova, Veronika Sandhu, Sameena Flechtenmacher, Christa Koveshazi, Istvan Neumeier, Florian Padrón-Laso, Víctor Jonke, Žan Saravi, Babak Vollmer, Michael Vollmer, Andreas Hoffmann, Jürgen Engel, Michael Ristow, Oliver Freudlsperger, Christian J Clin Med Article Background: Ex vivo fluorescent confocal microscopy (FCM) is a novel and effective method for a fast-automatized histological tissue examination. In contrast, conventional diagnostic methods are primarily based on the skills of the histopathologist. In this study, we investigated the potential of convolutional neural networks (CNNs) for automatized classification of oral squamous cell carcinoma via ex vivo FCM imaging for the first time. Material and Methods: Tissue samples from 20 patients were collected, scanned with an ex vivo confocal microscope immediately after resection, and investigated histopathologically. A CNN architecture (MobileNet) was trained and tested for accuracy. Results: The model achieved a sensitivity of 0.47 and specificity of 0.96 in the automated classification of cancerous tissue in our study. Conclusion: In this preliminary work, we trained a CNN model on a limited number of ex vivo FCM images and obtained promising results in the automated classification of cancerous tissue. Further studies using large sample sizes are warranted to introduce this technology into clinics. MDPI 2021-11-16 /pmc/articles/PMC8618824/ /pubmed/34830608 http://dx.doi.org/10.3390/jcm10225326 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Shavlokhova, Veronika Sandhu, Sameena Flechtenmacher, Christa Koveshazi, Istvan Neumeier, Florian Padrón-Laso, Víctor Jonke, Žan Saravi, Babak Vollmer, Michael Vollmer, Andreas Hoffmann, Jürgen Engel, Michael Ristow, Oliver Freudlsperger, Christian Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study |
title | Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study |
title_full | Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study |
title_fullStr | Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study |
title_full_unstemmed | Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study |
title_short | Deep Learning on Oral Squamous Cell Carcinoma Ex Vivo Fluorescent Confocal Microscopy Data: A Feasibility Study |
title_sort | deep learning on oral squamous cell carcinoma ex vivo fluorescent confocal microscopy data: a feasibility study |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8618824/ https://www.ncbi.nlm.nih.gov/pubmed/34830608 http://dx.doi.org/10.3390/jcm10225326 |
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