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A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control
BACKGROUND: Low temperature freezing stress has adverse effects on wheat seedling growth and final yield. The traditional method to evaluate the wheat injury caused by the freezing stress is by visual observations, which is time-consuming and laborious. Therefore, a more efficient and accurate metho...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620711/ https://www.ncbi.nlm.nih.gov/pubmed/34836556 http://dx.doi.org/10.1186/s13007-021-00821-7 |
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author | Fu, Xiuqing Bai, Yang Zhou, Jing Zhang, Hongwen Xian, Jieyu |
author_facet | Fu, Xiuqing Bai, Yang Zhou, Jing Zhang, Hongwen Xian, Jieyu |
author_sort | Fu, Xiuqing |
collection | PubMed |
description | BACKGROUND: Low temperature freezing stress has adverse effects on wheat seedling growth and final yield. The traditional method to evaluate the wheat injury caused by the freezing stress is by visual observations, which is time-consuming and laborious. Therefore, a more efficient and accurate method for freezing damage identification is urgently needed. RESULTS: A high-throughput phenotyping system was developed in this paper, namely, RGB freezing injury system, to effectively and efficiently quantify the wheat freezing injury in the field environments. The system is able to automatically collect, processing, and analyze the wheat images collected using a mobile phenotype cabin in the field conditions. A data management system was also developed to store and manage the original images and the calculated phenotypic data in the system. In this experiment, a total of 128 wheat varieties were planted, three nitrogen concentrations were applied and two biological and technical replicates were performed. And wheat canopy images were collected at the seedling pulling stage and three image features were extracted for each wheat samples, including ExG, ExR and ExV. We compared different test parameters and found that the coverage had a greater impact on freezing injury. Therefore, we preliminarily divided four grades of freezing injury according to the test results to evaluate the freezing injury of different varieties of wheat at the seedling stage. CONCLUSIONS: The automatic phenotypic analysis method of freezing injury provides an alternative solution for high-throughput freezing damage analysis of field crops and it can be used to quantify freezing stress and has guiding significance for accelerating the selection of wheat excellent frost resistance genotypes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13007-021-00821-7. |
format | Online Article Text |
id | pubmed-8620711 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-86207112021-11-29 A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control Fu, Xiuqing Bai, Yang Zhou, Jing Zhang, Hongwen Xian, Jieyu Plant Methods Research BACKGROUND: Low temperature freezing stress has adverse effects on wheat seedling growth and final yield. The traditional method to evaluate the wheat injury caused by the freezing stress is by visual observations, which is time-consuming and laborious. Therefore, a more efficient and accurate method for freezing damage identification is urgently needed. RESULTS: A high-throughput phenotyping system was developed in this paper, namely, RGB freezing injury system, to effectively and efficiently quantify the wheat freezing injury in the field environments. The system is able to automatically collect, processing, and analyze the wheat images collected using a mobile phenotype cabin in the field conditions. A data management system was also developed to store and manage the original images and the calculated phenotypic data in the system. In this experiment, a total of 128 wheat varieties were planted, three nitrogen concentrations were applied and two biological and technical replicates were performed. And wheat canopy images were collected at the seedling pulling stage and three image features were extracted for each wheat samples, including ExG, ExR and ExV. We compared different test parameters and found that the coverage had a greater impact on freezing injury. Therefore, we preliminarily divided four grades of freezing injury according to the test results to evaluate the freezing injury of different varieties of wheat at the seedling stage. CONCLUSIONS: The automatic phenotypic analysis method of freezing injury provides an alternative solution for high-throughput freezing damage analysis of field crops and it can be used to quantify freezing stress and has guiding significance for accelerating the selection of wheat excellent frost resistance genotypes. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s13007-021-00821-7. BioMed Central 2021-11-26 /pmc/articles/PMC8620711/ /pubmed/34836556 http://dx.doi.org/10.1186/s13007-021-00821-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Fu, Xiuqing Bai, Yang Zhou, Jing Zhang, Hongwen Xian, Jieyu A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control |
title | A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control |
title_full | A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control |
title_fullStr | A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control |
title_full_unstemmed | A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control |
title_short | A method for obtaining field wheat freezing injury phenotype based on RGB camera and software control |
title_sort | method for obtaining field wheat freezing injury phenotype based on rgb camera and software control |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620711/ https://www.ncbi.nlm.nih.gov/pubmed/34836556 http://dx.doi.org/10.1186/s13007-021-00821-7 |
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