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Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia

Duckweeds, or Lemnaceae, are widespread aquatic plants. Morphology-based identification of duckweed species is difficult because of their structural complexity. Hence, molecular tools provide significant advantages for characterizing and selecting species or clones for sustainable commercial use. In...

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Autores principales: Al-Dakhil, Mohammed, Alghamdi, Salem, Migdadi, Hussein, Afzal, Muhammad, Ali, Ahmed Abdelrahim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620982/
https://www.ncbi.nlm.nih.gov/pubmed/34834801
http://dx.doi.org/10.3390/plants10112438
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author Al-Dakhil, Mohammed
Alghamdi, Salem
Migdadi, Hussein
Afzal, Muhammad
Ali, Ahmed Abdelrahim
author_facet Al-Dakhil, Mohammed
Alghamdi, Salem
Migdadi, Hussein
Afzal, Muhammad
Ali, Ahmed Abdelrahim
author_sort Al-Dakhil, Mohammed
collection PubMed
description Duckweeds, or Lemnaceae, are widespread aquatic plants. Morphology-based identification of duckweed species is difficult because of their structural complexity. Hence, molecular tools provide significant advantages for characterizing and selecting species or clones for sustainable commercial use. In this study, we collected and characterized ten duckweed isolates from nine different regions in Saudi Arabia (SA). Based on the morphological characterization and phylogenetic analysis of intergenic spacer sequences of chloroplast DNA using six barcoding markers, the clones were classified into three genera, represented by seven species: Lemna gibba L., Lemna minor L., Lemna japonica Landolt, Lemna aequinoctialis Welw., Lemna perpusilla Torr., Spirodela polyryiza (L.) Schleid., and Landoltia punctate G. Mey. Lemna gibba was revealed to be a distinct dominant duckweed species in many regions of SA. Five barcoding markers showed that L. gibba, L. minor, and L. punctata were the most widely distributed species in the country. However, L. punctata, L. perpusilla, and S. polyryiza were the dominant species in the Al-Qassim, Madinah-1, and Madinah-2 regions, respectively. Moreover, the morphological traits revealed variations for these clones, relative to other studied duckweed clones. According to the results obtained in this study, three out of six plastid markers (trnH-psbA, matK, and atpF-atpH) helped to identify the dominant duckweed species in Saudi Arabia. Further evaluation based on adaptability, molecular genetic studies, and functional genomics is needed for these species to be used at the commercial level in Saudi Arabia.
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spelling pubmed-86209822021-11-27 Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia Al-Dakhil, Mohammed Alghamdi, Salem Migdadi, Hussein Afzal, Muhammad Ali, Ahmed Abdelrahim Plants (Basel) Article Duckweeds, or Lemnaceae, are widespread aquatic plants. Morphology-based identification of duckweed species is difficult because of their structural complexity. Hence, molecular tools provide significant advantages for characterizing and selecting species or clones for sustainable commercial use. In this study, we collected and characterized ten duckweed isolates from nine different regions in Saudi Arabia (SA). Based on the morphological characterization and phylogenetic analysis of intergenic spacer sequences of chloroplast DNA using six barcoding markers, the clones were classified into three genera, represented by seven species: Lemna gibba L., Lemna minor L., Lemna japonica Landolt, Lemna aequinoctialis Welw., Lemna perpusilla Torr., Spirodela polyryiza (L.) Schleid., and Landoltia punctate G. Mey. Lemna gibba was revealed to be a distinct dominant duckweed species in many regions of SA. Five barcoding markers showed that L. gibba, L. minor, and L. punctata were the most widely distributed species in the country. However, L. punctata, L. perpusilla, and S. polyryiza were the dominant species in the Al-Qassim, Madinah-1, and Madinah-2 regions, respectively. Moreover, the morphological traits revealed variations for these clones, relative to other studied duckweed clones. According to the results obtained in this study, three out of six plastid markers (trnH-psbA, matK, and atpF-atpH) helped to identify the dominant duckweed species in Saudi Arabia. Further evaluation based on adaptability, molecular genetic studies, and functional genomics is needed for these species to be used at the commercial level in Saudi Arabia. MDPI 2021-11-12 /pmc/articles/PMC8620982/ /pubmed/34834801 http://dx.doi.org/10.3390/plants10112438 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Al-Dakhil, Mohammed
Alghamdi, Salem
Migdadi, Hussein
Afzal, Muhammad
Ali, Ahmed Abdelrahim
Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia
title Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia
title_full Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia
title_fullStr Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia
title_full_unstemmed Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia
title_short Morphological Characterization and DNA Barcoding of Duckweed Species in Saudi Arabia
title_sort morphological characterization and dna barcoding of duckweed species in saudi arabia
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8620982/
https://www.ncbi.nlm.nih.gov/pubmed/34834801
http://dx.doi.org/10.3390/plants10112438
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