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Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning

Abdominal aortic aneurysms (AAA) may remain clinically silent until they enlarge and patients present with a potentially lethal rupture. This necessitates early detection and elective treatment. The goal of this study was to develop an easy-to-train algorithm which is capable of automated AAA screen...

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Autores principales: Golla, Alena-K., Tönnes, Christian, Russ, Tom, Bauer, Dominik F., Froelich, Matthias F., Diehl, Steffen J., Schoenberg, Stefan O., Keese, Michael, Schad, Lothar R., Zöllner, Frank G., Rink, Johann S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8621263/
https://www.ncbi.nlm.nih.gov/pubmed/34829478
http://dx.doi.org/10.3390/diagnostics11112131
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author Golla, Alena-K.
Tönnes, Christian
Russ, Tom
Bauer, Dominik F.
Froelich, Matthias F.
Diehl, Steffen J.
Schoenberg, Stefan O.
Keese, Michael
Schad, Lothar R.
Zöllner, Frank G.
Rink, Johann S.
author_facet Golla, Alena-K.
Tönnes, Christian
Russ, Tom
Bauer, Dominik F.
Froelich, Matthias F.
Diehl, Steffen J.
Schoenberg, Stefan O.
Keese, Michael
Schad, Lothar R.
Zöllner, Frank G.
Rink, Johann S.
author_sort Golla, Alena-K.
collection PubMed
description Abdominal aortic aneurysms (AAA) may remain clinically silent until they enlarge and patients present with a potentially lethal rupture. This necessitates early detection and elective treatment. The goal of this study was to develop an easy-to-train algorithm which is capable of automated AAA screening in CT scans and can be applied to an intra-hospital environment. Three deep convolutional neural networks (ResNet, VGG-16 and AlexNet) were adapted for 3D classification and applied to a dataset consisting of 187 heterogenous CT scans. The 3D ResNet outperformed both other networks. Across the five folds of the first training dataset it achieved an accuracy of 0.856 and an area under the curve (AUC) of 0.926. Subsequently, the algorithms performance was verified on a second data set containing 106 scans, where it ran fully automated and resulted in an accuracy of 0.953 and an AUC of 0.971. A layer-wise relevance propagation (LRP) made the decision process interpretable and showed that the network correctly focused on the aortic lumen. In conclusion, the deep learning-based screening proved to be robust and showed high performance even on a heterogeneous multi-center data set. Integration into hospital workflow and its effect on aneurysm management would be an exciting topic of future research.
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spelling pubmed-86212632021-11-27 Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning Golla, Alena-K. Tönnes, Christian Russ, Tom Bauer, Dominik F. Froelich, Matthias F. Diehl, Steffen J. Schoenberg, Stefan O. Keese, Michael Schad, Lothar R. Zöllner, Frank G. Rink, Johann S. Diagnostics (Basel) Article Abdominal aortic aneurysms (AAA) may remain clinically silent until they enlarge and patients present with a potentially lethal rupture. This necessitates early detection and elective treatment. The goal of this study was to develop an easy-to-train algorithm which is capable of automated AAA screening in CT scans and can be applied to an intra-hospital environment. Three deep convolutional neural networks (ResNet, VGG-16 and AlexNet) were adapted for 3D classification and applied to a dataset consisting of 187 heterogenous CT scans. The 3D ResNet outperformed both other networks. Across the five folds of the first training dataset it achieved an accuracy of 0.856 and an area under the curve (AUC) of 0.926. Subsequently, the algorithms performance was verified on a second data set containing 106 scans, where it ran fully automated and resulted in an accuracy of 0.953 and an AUC of 0.971. A layer-wise relevance propagation (LRP) made the decision process interpretable and showed that the network correctly focused on the aortic lumen. In conclusion, the deep learning-based screening proved to be robust and showed high performance even on a heterogeneous multi-center data set. Integration into hospital workflow and its effect on aneurysm management would be an exciting topic of future research. MDPI 2021-11-17 /pmc/articles/PMC8621263/ /pubmed/34829478 http://dx.doi.org/10.3390/diagnostics11112131 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Golla, Alena-K.
Tönnes, Christian
Russ, Tom
Bauer, Dominik F.
Froelich, Matthias F.
Diehl, Steffen J.
Schoenberg, Stefan O.
Keese, Michael
Schad, Lothar R.
Zöllner, Frank G.
Rink, Johann S.
Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
title Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
title_full Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
title_fullStr Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
title_full_unstemmed Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
title_short Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
title_sort automated screening for abdominal aortic aneurysm in ct scans under clinical conditions using deep learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8621263/
https://www.ncbi.nlm.nih.gov/pubmed/34829478
http://dx.doi.org/10.3390/diagnostics11112131
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