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Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning
Abdominal aortic aneurysms (AAA) may remain clinically silent until they enlarge and patients present with a potentially lethal rupture. This necessitates early detection and elective treatment. The goal of this study was to develop an easy-to-train algorithm which is capable of automated AAA screen...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8621263/ https://www.ncbi.nlm.nih.gov/pubmed/34829478 http://dx.doi.org/10.3390/diagnostics11112131 |
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author | Golla, Alena-K. Tönnes, Christian Russ, Tom Bauer, Dominik F. Froelich, Matthias F. Diehl, Steffen J. Schoenberg, Stefan O. Keese, Michael Schad, Lothar R. Zöllner, Frank G. Rink, Johann S. |
author_facet | Golla, Alena-K. Tönnes, Christian Russ, Tom Bauer, Dominik F. Froelich, Matthias F. Diehl, Steffen J. Schoenberg, Stefan O. Keese, Michael Schad, Lothar R. Zöllner, Frank G. Rink, Johann S. |
author_sort | Golla, Alena-K. |
collection | PubMed |
description | Abdominal aortic aneurysms (AAA) may remain clinically silent until they enlarge and patients present with a potentially lethal rupture. This necessitates early detection and elective treatment. The goal of this study was to develop an easy-to-train algorithm which is capable of automated AAA screening in CT scans and can be applied to an intra-hospital environment. Three deep convolutional neural networks (ResNet, VGG-16 and AlexNet) were adapted for 3D classification and applied to a dataset consisting of 187 heterogenous CT scans. The 3D ResNet outperformed both other networks. Across the five folds of the first training dataset it achieved an accuracy of 0.856 and an area under the curve (AUC) of 0.926. Subsequently, the algorithms performance was verified on a second data set containing 106 scans, where it ran fully automated and resulted in an accuracy of 0.953 and an AUC of 0.971. A layer-wise relevance propagation (LRP) made the decision process interpretable and showed that the network correctly focused on the aortic lumen. In conclusion, the deep learning-based screening proved to be robust and showed high performance even on a heterogeneous multi-center data set. Integration into hospital workflow and its effect on aneurysm management would be an exciting topic of future research. |
format | Online Article Text |
id | pubmed-8621263 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86212632021-11-27 Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning Golla, Alena-K. Tönnes, Christian Russ, Tom Bauer, Dominik F. Froelich, Matthias F. Diehl, Steffen J. Schoenberg, Stefan O. Keese, Michael Schad, Lothar R. Zöllner, Frank G. Rink, Johann S. Diagnostics (Basel) Article Abdominal aortic aneurysms (AAA) may remain clinically silent until they enlarge and patients present with a potentially lethal rupture. This necessitates early detection and elective treatment. The goal of this study was to develop an easy-to-train algorithm which is capable of automated AAA screening in CT scans and can be applied to an intra-hospital environment. Three deep convolutional neural networks (ResNet, VGG-16 and AlexNet) were adapted for 3D classification and applied to a dataset consisting of 187 heterogenous CT scans. The 3D ResNet outperformed both other networks. Across the five folds of the first training dataset it achieved an accuracy of 0.856 and an area under the curve (AUC) of 0.926. Subsequently, the algorithms performance was verified on a second data set containing 106 scans, where it ran fully automated and resulted in an accuracy of 0.953 and an AUC of 0.971. A layer-wise relevance propagation (LRP) made the decision process interpretable and showed that the network correctly focused on the aortic lumen. In conclusion, the deep learning-based screening proved to be robust and showed high performance even on a heterogeneous multi-center data set. Integration into hospital workflow and its effect on aneurysm management would be an exciting topic of future research. MDPI 2021-11-17 /pmc/articles/PMC8621263/ /pubmed/34829478 http://dx.doi.org/10.3390/diagnostics11112131 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Golla, Alena-K. Tönnes, Christian Russ, Tom Bauer, Dominik F. Froelich, Matthias F. Diehl, Steffen J. Schoenberg, Stefan O. Keese, Michael Schad, Lothar R. Zöllner, Frank G. Rink, Johann S. Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning |
title | Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning |
title_full | Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning |
title_fullStr | Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning |
title_full_unstemmed | Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning |
title_short | Automated Screening for Abdominal Aortic Aneurysm in CT Scans under Clinical Conditions Using Deep Learning |
title_sort | automated screening for abdominal aortic aneurysm in ct scans under clinical conditions using deep learning |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8621263/ https://www.ncbi.nlm.nih.gov/pubmed/34829478 http://dx.doi.org/10.3390/diagnostics11112131 |
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