Cargando…

Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress

Cadmium (Cd) pollution is a widespread environmental problem. In this study, we explored the transcriptome and biochemical responses of goldenrain tree (Koelreuteria paniculata Laxm.) leaves and roots to Cd stress. Leaf and root growth decreased substantially under Cd stress (50 mg/L CdCl(2)), but l...

Descripción completa

Detalles Bibliográficos
Autores principales: He, Qihao, Zhou, Tao, Sun, Jikang, Wang, Ping, Yang, Chunping, Bai, Lei, Liu, Zhiming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8621797/
https://www.ncbi.nlm.nih.gov/pubmed/34831798
http://dx.doi.org/10.3390/ijerph182212046
_version_ 1784605542045450240
author He, Qihao
Zhou, Tao
Sun, Jikang
Wang, Ping
Yang, Chunping
Bai, Lei
Liu, Zhiming
author_facet He, Qihao
Zhou, Tao
Sun, Jikang
Wang, Ping
Yang, Chunping
Bai, Lei
Liu, Zhiming
author_sort He, Qihao
collection PubMed
description Cadmium (Cd) pollution is a widespread environmental problem. In this study, we explored the transcriptome and biochemical responses of goldenrain tree (Koelreuteria paniculata Laxm.) leaves and roots to Cd stress. Leaf and root growth decreased substantially under Cd stress (50 mg/L CdCl(2)), but leaf and root antioxidant mechanisms were significantly activated. In RNA-seq analysis, roots treated with 25 mg/L CdCl(2) featured enriched GO terms in cellular components related to intracellular ribonucleoprotein complex, ribonucleoprotein complex, and macromolecular complex. In leaves under Cd stress, most differentially expressed genes were enriched in the cellular component terms intrinsic component of membrane and membrane part. Weighted gene co-expression network analysis and analysis of module–trait relations revealed candidate genes associated with superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities and malondialdehyde (MDA). Ten transcription factors responded to Cd stress expression, including those in C2H2, MYB, WRKY, and bZIP families. Transcriptomic analysis of goldenrain tree revealed that Cd stress rapidly induced the intracellular ribonucleoprotein complex in the roots and the intrinsic component of membrane in the leaves. The results also indicate directions for further analyses of molecular mechanisms of Cd tolerance and accumulation in goldenrain tree.
format Online
Article
Text
id pubmed-8621797
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-86217972021-11-27 Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress He, Qihao Zhou, Tao Sun, Jikang Wang, Ping Yang, Chunping Bai, Lei Liu, Zhiming Int J Environ Res Public Health Article Cadmium (Cd) pollution is a widespread environmental problem. In this study, we explored the transcriptome and biochemical responses of goldenrain tree (Koelreuteria paniculata Laxm.) leaves and roots to Cd stress. Leaf and root growth decreased substantially under Cd stress (50 mg/L CdCl(2)), but leaf and root antioxidant mechanisms were significantly activated. In RNA-seq analysis, roots treated with 25 mg/L CdCl(2) featured enriched GO terms in cellular components related to intracellular ribonucleoprotein complex, ribonucleoprotein complex, and macromolecular complex. In leaves under Cd stress, most differentially expressed genes were enriched in the cellular component terms intrinsic component of membrane and membrane part. Weighted gene co-expression network analysis and analysis of module–trait relations revealed candidate genes associated with superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT) activities and malondialdehyde (MDA). Ten transcription factors responded to Cd stress expression, including those in C2H2, MYB, WRKY, and bZIP families. Transcriptomic analysis of goldenrain tree revealed that Cd stress rapidly induced the intracellular ribonucleoprotein complex in the roots and the intrinsic component of membrane in the leaves. The results also indicate directions for further analyses of molecular mechanisms of Cd tolerance and accumulation in goldenrain tree. MDPI 2021-11-16 /pmc/articles/PMC8621797/ /pubmed/34831798 http://dx.doi.org/10.3390/ijerph182212046 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
He, Qihao
Zhou, Tao
Sun, Jikang
Wang, Ping
Yang, Chunping
Bai, Lei
Liu, Zhiming
Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress
title Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress
title_full Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress
title_fullStr Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress
title_full_unstemmed Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress
title_short Transcriptome Profiles of Leaves and Roots of Goldenrain Tree (Koelreuteria paniculata Laxm.) in Response to Cadmium Stress
title_sort transcriptome profiles of leaves and roots of goldenrain tree (koelreuteria paniculata laxm.) in response to cadmium stress
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8621797/
https://www.ncbi.nlm.nih.gov/pubmed/34831798
http://dx.doi.org/10.3390/ijerph182212046
work_keys_str_mv AT heqihao transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress
AT zhoutao transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress
AT sunjikang transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress
AT wangping transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress
AT yangchunping transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress
AT bailei transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress
AT liuzhiming transcriptomeprofilesofleavesandrootsofgoldenraintreekoelreuteriapaniculatalaxminresponsetocadmiumstress