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Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation

Dioon holmgrenii De Luca, Sabato et Vázq.Torres is an endangered species; it is endemic and its distribution is restricted to the biogeographic province of the Mexican Pacific Coast. The aim of this work was to determine the diversity and genetic structure of nine populations. The genetic diversity...

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Autores principales: Velasco-García, Mario Valerio, Ramírez-Herrera, Carlos, López-Upton, Javier, Valdez-Hernández, Juan Ignacio, López-Sánchez, Higinio, López-Mata, Lauro
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623071/
https://www.ncbi.nlm.nih.gov/pubmed/34834614
http://dx.doi.org/10.3390/plants10112250
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author Velasco-García, Mario Valerio
Ramírez-Herrera, Carlos
López-Upton, Javier
Valdez-Hernández, Juan Ignacio
López-Sánchez, Higinio
López-Mata, Lauro
author_facet Velasco-García, Mario Valerio
Ramírez-Herrera, Carlos
López-Upton, Javier
Valdez-Hernández, Juan Ignacio
López-Sánchez, Higinio
López-Mata, Lauro
author_sort Velasco-García, Mario Valerio
collection PubMed
description Dioon holmgrenii De Luca, Sabato et Vázq.Torres is an endangered species; it is endemic and its distribution is restricted to the biogeographic province of the Mexican Pacific Coast. The aim of this work was to determine the diversity and genetic structure of nine populations. The genetic diversity parameters and Wright’s F statistics were determined with six microsatellite loci. The genetic structure was determined by using the Structure software and by a discriminant analysis. The genetic diversity of the populations was high. The proportion of polymorphic loci was 0.89, the observed heterogeneity was higher (Ho = 0.62 to 0.98) than expected (He = 0.48 to 0.78), and the fixation index was negative (IF = −0.091 to −0.601). Heterozygous deficiency (FIT = 0.071) was found at the species level and heterozygotes excess (FIS = −0.287) at the population level. The genetic differentiation between populations was high (FST = 0.287), with the number of migrants less than one. Three groups of populations were differentiated, and the variation within populations, between populations, and between groups was: 65.5, 26.3, and 8.2%, respectively. Multiple factors explain the high genetic diversity, while the genetic structure is due to geographic barriers. Community reserves are urgent in at least one most diverse population of each group.
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spelling pubmed-86230712021-11-27 Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation Velasco-García, Mario Valerio Ramírez-Herrera, Carlos López-Upton, Javier Valdez-Hernández, Juan Ignacio López-Sánchez, Higinio López-Mata, Lauro Plants (Basel) Article Dioon holmgrenii De Luca, Sabato et Vázq.Torres is an endangered species; it is endemic and its distribution is restricted to the biogeographic province of the Mexican Pacific Coast. The aim of this work was to determine the diversity and genetic structure of nine populations. The genetic diversity parameters and Wright’s F statistics were determined with six microsatellite loci. The genetic structure was determined by using the Structure software and by a discriminant analysis. The genetic diversity of the populations was high. The proportion of polymorphic loci was 0.89, the observed heterogeneity was higher (Ho = 0.62 to 0.98) than expected (He = 0.48 to 0.78), and the fixation index was negative (IF = −0.091 to −0.601). Heterozygous deficiency (FIT = 0.071) was found at the species level and heterozygotes excess (FIS = −0.287) at the population level. The genetic differentiation between populations was high (FST = 0.287), with the number of migrants less than one. Three groups of populations were differentiated, and the variation within populations, between populations, and between groups was: 65.5, 26.3, and 8.2%, respectively. Multiple factors explain the high genetic diversity, while the genetic structure is due to geographic barriers. Community reserves are urgent in at least one most diverse population of each group. MDPI 2021-10-21 /pmc/articles/PMC8623071/ /pubmed/34834614 http://dx.doi.org/10.3390/plants10112250 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Velasco-García, Mario Valerio
Ramírez-Herrera, Carlos
López-Upton, Javier
Valdez-Hernández, Juan Ignacio
López-Sánchez, Higinio
López-Mata, Lauro
Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation
title Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation
title_full Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation
title_fullStr Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation
title_full_unstemmed Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation
title_short Diversity and Genetic Structure of Dioon holmgrenii (Cycadales: Zamiaceae) in the Mexican Pacific Coast Biogeographic Province: Implications for Conservation
title_sort diversity and genetic structure of dioon holmgrenii (cycadales: zamiaceae) in the mexican pacific coast biogeographic province: implications for conservation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623071/
https://www.ncbi.nlm.nih.gov/pubmed/34834614
http://dx.doi.org/10.3390/plants10112250
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