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Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
Bioinformatics analysis of the complete transcriptome of Fasciola hepatica, identified a total of ten putative carboxylesterase transcripts, including a 3146 bp mRNA transcript coding a 2205 bp open reading frame that translates into a protein of 735 amino acids, resulting in a predicted protein mas...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623527/ https://www.ncbi.nlm.nih.gov/pubmed/34832612 http://dx.doi.org/10.3390/pathogens10111454 |
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author | Pedroza-Gómez, Yaretzi J. Cossio-Bayugar, Raquel Aguilar-Díaz, Hugo Scarcella, Silvana Reynaud, Enrique Sanchez-Carbente, María del Rayo Narváez-Padilla, Verónica Miranda-Miranda, Estefan |
author_facet | Pedroza-Gómez, Yaretzi J. Cossio-Bayugar, Raquel Aguilar-Díaz, Hugo Scarcella, Silvana Reynaud, Enrique Sanchez-Carbente, María del Rayo Narváez-Padilla, Verónica Miranda-Miranda, Estefan |
author_sort | Pedroza-Gómez, Yaretzi J. |
collection | PubMed |
description | Bioinformatics analysis of the complete transcriptome of Fasciola hepatica, identified a total of ten putative carboxylesterase transcripts, including a 3146 bp mRNA transcript coding a 2205 bp open reading frame that translates into a protein of 735 amino acids, resulting in a predicted protein mass of 83.5 kDa and a putative carboxylesterase B enzyme. The gene coding for this enzyme was found in two reported F. hepatica complete genomes stretching 23,230 bp, containing two exons of 1282 and 1864 bp, respectively, as well as a 20,084 bp intron between the exons. The enzymatic activity was experimentally assayed on F. hepatica protein extracts by SDS-PAGE zymograms using synthetic chromogenic substrates, confirming both the theoretical molecular weight and carboxylesterase enzymatic activity. Further bioinformatics predicted that this enzyme is an integral component of the cellular membrane that should be active as a 167 kDa homodimer complex and polyacrylamide gel electrophoresis (PAGE) zymograms experiments confirmed the analysis. Additional bioinformatics analysis showed that DNA sequences that code for this particular enzyme are highly conserved in other parasitic trematodes, although they are labeled hypothetical proteins. |
format | Online Article Text |
id | pubmed-8623527 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86235272021-11-27 Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B Pedroza-Gómez, Yaretzi J. Cossio-Bayugar, Raquel Aguilar-Díaz, Hugo Scarcella, Silvana Reynaud, Enrique Sanchez-Carbente, María del Rayo Narváez-Padilla, Verónica Miranda-Miranda, Estefan Pathogens Article Bioinformatics analysis of the complete transcriptome of Fasciola hepatica, identified a total of ten putative carboxylesterase transcripts, including a 3146 bp mRNA transcript coding a 2205 bp open reading frame that translates into a protein of 735 amino acids, resulting in a predicted protein mass of 83.5 kDa and a putative carboxylesterase B enzyme. The gene coding for this enzyme was found in two reported F. hepatica complete genomes stretching 23,230 bp, containing two exons of 1282 and 1864 bp, respectively, as well as a 20,084 bp intron between the exons. The enzymatic activity was experimentally assayed on F. hepatica protein extracts by SDS-PAGE zymograms using synthetic chromogenic substrates, confirming both the theoretical molecular weight and carboxylesterase enzymatic activity. Further bioinformatics predicted that this enzyme is an integral component of the cellular membrane that should be active as a 167 kDa homodimer complex and polyacrylamide gel electrophoresis (PAGE) zymograms experiments confirmed the analysis. Additional bioinformatics analysis showed that DNA sequences that code for this particular enzyme are highly conserved in other parasitic trematodes, although they are labeled hypothetical proteins. MDPI 2021-11-10 /pmc/articles/PMC8623527/ /pubmed/34832612 http://dx.doi.org/10.3390/pathogens10111454 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Pedroza-Gómez, Yaretzi J. Cossio-Bayugar, Raquel Aguilar-Díaz, Hugo Scarcella, Silvana Reynaud, Enrique Sanchez-Carbente, María del Rayo Narváez-Padilla, Verónica Miranda-Miranda, Estefan Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B |
title | Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B |
title_full | Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B |
title_fullStr | Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B |
title_full_unstemmed | Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B |
title_short | Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B |
title_sort | transcriptome-based identification of a functional fasciola hepatica carboxylesterase b |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623527/ https://www.ncbi.nlm.nih.gov/pubmed/34832612 http://dx.doi.org/10.3390/pathogens10111454 |
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