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Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B

Bioinformatics analysis of the complete transcriptome of Fasciola hepatica, identified a total of ten putative carboxylesterase transcripts, including a 3146 bp mRNA transcript coding a 2205 bp open reading frame that translates into a protein of 735 amino acids, resulting in a predicted protein mas...

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Autores principales: Pedroza-Gómez, Yaretzi J., Cossio-Bayugar, Raquel, Aguilar-Díaz, Hugo, Scarcella, Silvana, Reynaud, Enrique, Sanchez-Carbente, María del Rayo, Narváez-Padilla, Verónica, Miranda-Miranda, Estefan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623527/
https://www.ncbi.nlm.nih.gov/pubmed/34832612
http://dx.doi.org/10.3390/pathogens10111454
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author Pedroza-Gómez, Yaretzi J.
Cossio-Bayugar, Raquel
Aguilar-Díaz, Hugo
Scarcella, Silvana
Reynaud, Enrique
Sanchez-Carbente, María del Rayo
Narváez-Padilla, Verónica
Miranda-Miranda, Estefan
author_facet Pedroza-Gómez, Yaretzi J.
Cossio-Bayugar, Raquel
Aguilar-Díaz, Hugo
Scarcella, Silvana
Reynaud, Enrique
Sanchez-Carbente, María del Rayo
Narváez-Padilla, Verónica
Miranda-Miranda, Estefan
author_sort Pedroza-Gómez, Yaretzi J.
collection PubMed
description Bioinformatics analysis of the complete transcriptome of Fasciola hepatica, identified a total of ten putative carboxylesterase transcripts, including a 3146 bp mRNA transcript coding a 2205 bp open reading frame that translates into a protein of 735 amino acids, resulting in a predicted protein mass of 83.5 kDa and a putative carboxylesterase B enzyme. The gene coding for this enzyme was found in two reported F. hepatica complete genomes stretching 23,230 bp, containing two exons of 1282 and 1864 bp, respectively, as well as a 20,084 bp intron between the exons. The enzymatic activity was experimentally assayed on F. hepatica protein extracts by SDS-PAGE zymograms using synthetic chromogenic substrates, confirming both the theoretical molecular weight and carboxylesterase enzymatic activity. Further bioinformatics predicted that this enzyme is an integral component of the cellular membrane that should be active as a 167 kDa homodimer complex and polyacrylamide gel electrophoresis (PAGE) zymograms experiments confirmed the analysis. Additional bioinformatics analysis showed that DNA sequences that code for this particular enzyme are highly conserved in other parasitic trematodes, although they are labeled hypothetical proteins.
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spelling pubmed-86235272021-11-27 Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B Pedroza-Gómez, Yaretzi J. Cossio-Bayugar, Raquel Aguilar-Díaz, Hugo Scarcella, Silvana Reynaud, Enrique Sanchez-Carbente, María del Rayo Narváez-Padilla, Verónica Miranda-Miranda, Estefan Pathogens Article Bioinformatics analysis of the complete transcriptome of Fasciola hepatica, identified a total of ten putative carboxylesterase transcripts, including a 3146 bp mRNA transcript coding a 2205 bp open reading frame that translates into a protein of 735 amino acids, resulting in a predicted protein mass of 83.5 kDa and a putative carboxylesterase B enzyme. The gene coding for this enzyme was found in two reported F. hepatica complete genomes stretching 23,230 bp, containing two exons of 1282 and 1864 bp, respectively, as well as a 20,084 bp intron between the exons. The enzymatic activity was experimentally assayed on F. hepatica protein extracts by SDS-PAGE zymograms using synthetic chromogenic substrates, confirming both the theoretical molecular weight and carboxylesterase enzymatic activity. Further bioinformatics predicted that this enzyme is an integral component of the cellular membrane that should be active as a 167 kDa homodimer complex and polyacrylamide gel electrophoresis (PAGE) zymograms experiments confirmed the analysis. Additional bioinformatics analysis showed that DNA sequences that code for this particular enzyme are highly conserved in other parasitic trematodes, although they are labeled hypothetical proteins. MDPI 2021-11-10 /pmc/articles/PMC8623527/ /pubmed/34832612 http://dx.doi.org/10.3390/pathogens10111454 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Pedroza-Gómez, Yaretzi J.
Cossio-Bayugar, Raquel
Aguilar-Díaz, Hugo
Scarcella, Silvana
Reynaud, Enrique
Sanchez-Carbente, María del Rayo
Narváez-Padilla, Verónica
Miranda-Miranda, Estefan
Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
title Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
title_full Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
title_fullStr Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
title_full_unstemmed Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
title_short Transcriptome-Based Identification of a Functional Fasciola hepatica Carboxylesterase B
title_sort transcriptome-based identification of a functional fasciola hepatica carboxylesterase b
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623527/
https://www.ncbi.nlm.nih.gov/pubmed/34832612
http://dx.doi.org/10.3390/pathogens10111454
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