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Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units
Background: Lactic acidosis is a heterogeneous condition with multiple underlying causes and associated outcomes. The use of multi-dimensional patient data to subtype lactic acidosis can personalize patient care. Machine learning consensus clustering may identify lactic acidosis subgroups with uniqu...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623582/ https://www.ncbi.nlm.nih.gov/pubmed/34834484 http://dx.doi.org/10.3390/jpm11111132 |
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author | Pattharanitima, Pattharawin Thongprayoon, Charat Petnak, Tananchai Srivali, Narat Gembillo, Guido Kaewput, Wisit Chesdachai, Supavit Vallabhajosyula, Saraschandra O’Corragain, Oisin A. Mao, Michael A. Garovic, Vesna D. Qureshi, Fawad Dillon, John J. Cheungpasitporn, Wisit |
author_facet | Pattharanitima, Pattharawin Thongprayoon, Charat Petnak, Tananchai Srivali, Narat Gembillo, Guido Kaewput, Wisit Chesdachai, Supavit Vallabhajosyula, Saraschandra O’Corragain, Oisin A. Mao, Michael A. Garovic, Vesna D. Qureshi, Fawad Dillon, John J. Cheungpasitporn, Wisit |
author_sort | Pattharanitima, Pattharawin |
collection | PubMed |
description | Background: Lactic acidosis is a heterogeneous condition with multiple underlying causes and associated outcomes. The use of multi-dimensional patient data to subtype lactic acidosis can personalize patient care. Machine learning consensus clustering may identify lactic acidosis subgroups with unique clinical profiles and outcomes. Methods: We used the Medical Information Mart for Intensive Care III database to abstract electronic medical record data from patients admitted to intensive care units (ICU) in a tertiary care hospital in the United States. We included patients who developed lactic acidosis (defined as serum lactate ≥ 4 mmol/L) within 48 h of ICU admission. We performed consensus clustering analysis based on patient characteristics, comorbidities, vital signs, organ supports, and laboratory data to identify clinically distinct lactic acidosis subgroups. We calculated standardized mean differences to show key subgroup features. We compared outcomes among subgroups. Results: We identified 1919 patients with lactic acidosis. The algorithm revealed three best unique lactic acidosis subgroups based on patient variables. Cluster 1 (n = 554) was characterized by old age, elective admission to cardiac surgery ICU, vasopressor use, mechanical ventilation use, and higher pH and serum bicarbonate. Cluster 2 (n = 815) was characterized by young age, admission to trauma/surgical ICU with higher blood pressure, lower comorbidity burden, lower severity index, and less vasopressor use. Cluster 3 (n = 550) was characterized by admission to medical ICU, history of liver disease and coagulopathy, acute kidney injury, lower blood pressure, higher comorbidity burden, higher severity index, higher serum lactate, and lower pH and serum bicarbonate. Cluster 3 had the worst outcomes, while cluster 1 had the most favorable outcomes in terms of persistent lactic acidosis and mortality. Conclusions: Consensus clustering analysis synthesized the pattern of clinical and laboratory data to reveal clinically distinct lactic acidosis subgroups with different outcomes. |
format | Online Article Text |
id | pubmed-8623582 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-86235822021-11-27 Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units Pattharanitima, Pattharawin Thongprayoon, Charat Petnak, Tananchai Srivali, Narat Gembillo, Guido Kaewput, Wisit Chesdachai, Supavit Vallabhajosyula, Saraschandra O’Corragain, Oisin A. Mao, Michael A. Garovic, Vesna D. Qureshi, Fawad Dillon, John J. Cheungpasitporn, Wisit J Pers Med Article Background: Lactic acidosis is a heterogeneous condition with multiple underlying causes and associated outcomes. The use of multi-dimensional patient data to subtype lactic acidosis can personalize patient care. Machine learning consensus clustering may identify lactic acidosis subgroups with unique clinical profiles and outcomes. Methods: We used the Medical Information Mart for Intensive Care III database to abstract electronic medical record data from patients admitted to intensive care units (ICU) in a tertiary care hospital in the United States. We included patients who developed lactic acidosis (defined as serum lactate ≥ 4 mmol/L) within 48 h of ICU admission. We performed consensus clustering analysis based on patient characteristics, comorbidities, vital signs, organ supports, and laboratory data to identify clinically distinct lactic acidosis subgroups. We calculated standardized mean differences to show key subgroup features. We compared outcomes among subgroups. Results: We identified 1919 patients with lactic acidosis. The algorithm revealed three best unique lactic acidosis subgroups based on patient variables. Cluster 1 (n = 554) was characterized by old age, elective admission to cardiac surgery ICU, vasopressor use, mechanical ventilation use, and higher pH and serum bicarbonate. Cluster 2 (n = 815) was characterized by young age, admission to trauma/surgical ICU with higher blood pressure, lower comorbidity burden, lower severity index, and less vasopressor use. Cluster 3 (n = 550) was characterized by admission to medical ICU, history of liver disease and coagulopathy, acute kidney injury, lower blood pressure, higher comorbidity burden, higher severity index, higher serum lactate, and lower pH and serum bicarbonate. Cluster 3 had the worst outcomes, while cluster 1 had the most favorable outcomes in terms of persistent lactic acidosis and mortality. Conclusions: Consensus clustering analysis synthesized the pattern of clinical and laboratory data to reveal clinically distinct lactic acidosis subgroups with different outcomes. MDPI 2021-11-02 /pmc/articles/PMC8623582/ /pubmed/34834484 http://dx.doi.org/10.3390/jpm11111132 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Pattharanitima, Pattharawin Thongprayoon, Charat Petnak, Tananchai Srivali, Narat Gembillo, Guido Kaewput, Wisit Chesdachai, Supavit Vallabhajosyula, Saraschandra O’Corragain, Oisin A. Mao, Michael A. Garovic, Vesna D. Qureshi, Fawad Dillon, John J. Cheungpasitporn, Wisit Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units |
title | Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units |
title_full | Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units |
title_fullStr | Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units |
title_full_unstemmed | Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units |
title_short | Machine Learning Consensus Clustering Approach for Patients with Lactic Acidosis in Intensive Care Units |
title_sort | machine learning consensus clustering approach for patients with lactic acidosis in intensive care units |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623582/ https://www.ncbi.nlm.nih.gov/pubmed/34834484 http://dx.doi.org/10.3390/jpm11111132 |
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