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Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus

A tagged or reporter astrovirus can be a valuable tool for the analysis of various aspects of the virus life cycle, and to aid in the development of genetically engineered astroviruses as vectors. Here, transposon-mediated insertion mutagenesis was used to insert a 15-nucleotide (nt) sequence into r...

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Autores principales: Du, Yanjie, Liu, Teng, Qin, Yifeng, Dong, Qinting, Chen, Ying, Ouyang, Kang, Wei, Zuzhang, Huang, Weijian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623754/
https://www.ncbi.nlm.nih.gov/pubmed/34834925
http://dx.doi.org/10.3390/v13112119
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author Du, Yanjie
Liu, Teng
Qin, Yifeng
Dong, Qinting
Chen, Ying
Ouyang, Kang
Wei, Zuzhang
Huang, Weijian
author_facet Du, Yanjie
Liu, Teng
Qin, Yifeng
Dong, Qinting
Chen, Ying
Ouyang, Kang
Wei, Zuzhang
Huang, Weijian
author_sort Du, Yanjie
collection PubMed
description A tagged or reporter astrovirus can be a valuable tool for the analysis of various aspects of the virus life cycle, and to aid in the development of genetically engineered astroviruses as vectors. Here, transposon-mediated insertion mutagenesis was used to insert a 15-nucleotide (nt) sequence into random sites of open reading frame 1a (ORF1a) based on an infectious full-length cDNA clone of porcine astrovirus (PAstV). Five sites in the predicted coiled-coil structures (CC), genome-linked protein (VPg), and hypervariable region (HVR) in ORF1a of the PAstV genome were identified that could tolerate random 15 nt insertions. Incorporation of the commonly used epitope tags, His, Flag, and HA, into four of the five insertion sites permitted the production of infectious viruses and allowed recognition by specifically tagged monoclonal antibodies. The results of immuno-fluorescent assays showed that Flag-tagged ORF1a protein overlapped partially with capsid and ORF2b proteins in the cytoplasm. Improved light-oxygen-voltage (iLOV) gene was also introduced at the insertion sites of CC, VPg, and HVR. Only one viable recombinant reporter PAstV expressing iLOV inserted in HVR was recovered. Biological analysis of the reporter virus showed that it displayed similar growth characteristics, and yet produced less infectious virus particles, when compared with the parental virus. The recombinant virus carrying the iLOV fused with the HVR of ORF1a protein maintained its stability and showed green fluorescence after 15 passages in cell cultures. The resultant fluorescently tagged virus could provide a promising tool for the rapid screening of antiviral drugs as well as allowing the visualization of PAstV infection and replication in living cells.
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spelling pubmed-86237542021-11-27 Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus Du, Yanjie Liu, Teng Qin, Yifeng Dong, Qinting Chen, Ying Ouyang, Kang Wei, Zuzhang Huang, Weijian Viruses Article A tagged or reporter astrovirus can be a valuable tool for the analysis of various aspects of the virus life cycle, and to aid in the development of genetically engineered astroviruses as vectors. Here, transposon-mediated insertion mutagenesis was used to insert a 15-nucleotide (nt) sequence into random sites of open reading frame 1a (ORF1a) based on an infectious full-length cDNA clone of porcine astrovirus (PAstV). Five sites in the predicted coiled-coil structures (CC), genome-linked protein (VPg), and hypervariable region (HVR) in ORF1a of the PAstV genome were identified that could tolerate random 15 nt insertions. Incorporation of the commonly used epitope tags, His, Flag, and HA, into four of the five insertion sites permitted the production of infectious viruses and allowed recognition by specifically tagged monoclonal antibodies. The results of immuno-fluorescent assays showed that Flag-tagged ORF1a protein overlapped partially with capsid and ORF2b proteins in the cytoplasm. Improved light-oxygen-voltage (iLOV) gene was also introduced at the insertion sites of CC, VPg, and HVR. Only one viable recombinant reporter PAstV expressing iLOV inserted in HVR was recovered. Biological analysis of the reporter virus showed that it displayed similar growth characteristics, and yet produced less infectious virus particles, when compared with the parental virus. The recombinant virus carrying the iLOV fused with the HVR of ORF1a protein maintained its stability and showed green fluorescence after 15 passages in cell cultures. The resultant fluorescently tagged virus could provide a promising tool for the rapid screening of antiviral drugs as well as allowing the visualization of PAstV infection and replication in living cells. MDPI 2021-10-21 /pmc/articles/PMC8623754/ /pubmed/34834925 http://dx.doi.org/10.3390/v13112119 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Du, Yanjie
Liu, Teng
Qin, Yifeng
Dong, Qinting
Chen, Ying
Ouyang, Kang
Wei, Zuzhang
Huang, Weijian
Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus
title Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus
title_full Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus
title_fullStr Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus
title_full_unstemmed Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus
title_short Insertion of Exogenous Genes within the ORF1a Coding Region of Porcine Astrovirus
title_sort insertion of exogenous genes within the orf1a coding region of porcine astrovirus
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8623754/
https://www.ncbi.nlm.nih.gov/pubmed/34834925
http://dx.doi.org/10.3390/v13112119
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