Cargando…

Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio

Organophosphate pesticides (OPPs) are one of the most widely used insecticides. OPPs exert their neurotoxic effects by inhibiting acetylcholine esterase (AChE). Most of the gross developmental abnormalities observed in OPP-treated fish, on the other hand, may not be explained solely by AChE inhibiti...

Descripción completa

Detalles Bibliográficos
Autores principales: Vasamsetti, Bala Murali Krishna, Chon, Kyongmi, Kim, Juyeong, Oh, Jin-A, Yoon, Chang-Young, Park, Hong-Hyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8624534/
https://www.ncbi.nlm.nih.gov/pubmed/34828343
http://dx.doi.org/10.3390/genes12111738
_version_ 1784606197325758464
author Vasamsetti, Bala Murali Krishna
Chon, Kyongmi
Kim, Juyeong
Oh, Jin-A
Yoon, Chang-Young
Park, Hong-Hyun
author_facet Vasamsetti, Bala Murali Krishna
Chon, Kyongmi
Kim, Juyeong
Oh, Jin-A
Yoon, Chang-Young
Park, Hong-Hyun
author_sort Vasamsetti, Bala Murali Krishna
collection PubMed
description Organophosphate pesticides (OPPs) are one of the most widely used insecticides. OPPs exert their neurotoxic effects by inhibiting acetylcholine esterase (AChE). Most of the gross developmental abnormalities observed in OPP-treated fish, on the other hand, may not be explained solely by AChE inhibition. To understand the overall molecular mechanisms involved in OPP toxicity, we used the zebrafish (ZF) model. We exposed ZF embryos to an OPP, phosmet, for 96 h, and then analyzed developmental abnormalities and performed whole transcriptome analysis. Phenotypic abnormalities, such as bradycardia, spine curvature, and growth retardation, were observed in phosmet-treated ZF (PTZF). Whole transcriptome analysis revealed 2190 differentially expressed genes (DEGs), with 822 and 1368 significantly up-and downregulated genes, respectively. System process and sensory and visual perception were among the top biological pathways affected by phosmet toxicity. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed significant enrichment of metabolic pathways, calcium signaling pathway, regulation of actin cytoskeleton, cardiac muscle contraction, drug metabolism–other enzymes, and phototransduction. Quantitative real-time PCR results of six DEGs agreed with the sequencing data expression profile trend. Our findings provide insights into the consequences of phosmet exposure in ZF, as well as an estimate of the potential risk of OPPs to off-target species.
format Online
Article
Text
id pubmed-8624534
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-86245342021-11-27 Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio Vasamsetti, Bala Murali Krishna Chon, Kyongmi Kim, Juyeong Oh, Jin-A Yoon, Chang-Young Park, Hong-Hyun Genes (Basel) Article Organophosphate pesticides (OPPs) are one of the most widely used insecticides. OPPs exert their neurotoxic effects by inhibiting acetylcholine esterase (AChE). Most of the gross developmental abnormalities observed in OPP-treated fish, on the other hand, may not be explained solely by AChE inhibition. To understand the overall molecular mechanisms involved in OPP toxicity, we used the zebrafish (ZF) model. We exposed ZF embryos to an OPP, phosmet, for 96 h, and then analyzed developmental abnormalities and performed whole transcriptome analysis. Phenotypic abnormalities, such as bradycardia, spine curvature, and growth retardation, were observed in phosmet-treated ZF (PTZF). Whole transcriptome analysis revealed 2190 differentially expressed genes (DEGs), with 822 and 1368 significantly up-and downregulated genes, respectively. System process and sensory and visual perception were among the top biological pathways affected by phosmet toxicity. Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed significant enrichment of metabolic pathways, calcium signaling pathway, regulation of actin cytoskeleton, cardiac muscle contraction, drug metabolism–other enzymes, and phototransduction. Quantitative real-time PCR results of six DEGs agreed with the sequencing data expression profile trend. Our findings provide insights into the consequences of phosmet exposure in ZF, as well as an estimate of the potential risk of OPPs to off-target species. MDPI 2021-10-29 /pmc/articles/PMC8624534/ /pubmed/34828343 http://dx.doi.org/10.3390/genes12111738 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Vasamsetti, Bala Murali Krishna
Chon, Kyongmi
Kim, Juyeong
Oh, Jin-A
Yoon, Chang-Young
Park, Hong-Hyun
Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio
title Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio
title_full Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio
title_fullStr Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio
title_full_unstemmed Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio
title_short Transcriptome-Based Identification of Genes Responding to the Organophosphate Pesticide Phosmet in Danio rerio
title_sort transcriptome-based identification of genes responding to the organophosphate pesticide phosmet in danio rerio
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8624534/
https://www.ncbi.nlm.nih.gov/pubmed/34828343
http://dx.doi.org/10.3390/genes12111738
work_keys_str_mv AT vasamsettibalamuralikrishna transcriptomebasedidentificationofgenesrespondingtotheorganophosphatepesticidephosmetindaniorerio
AT chonkyongmi transcriptomebasedidentificationofgenesrespondingtotheorganophosphatepesticidephosmetindaniorerio
AT kimjuyeong transcriptomebasedidentificationofgenesrespondingtotheorganophosphatepesticidephosmetindaniorerio
AT ohjina transcriptomebasedidentificationofgenesrespondingtotheorganophosphatepesticidephosmetindaniorerio
AT yoonchangyoung transcriptomebasedidentificationofgenesrespondingtotheorganophosphatepesticidephosmetindaniorerio
AT parkhonghyun transcriptomebasedidentificationofgenesrespondingtotheorganophosphatepesticidephosmetindaniorerio