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A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers

The SARS-CoV-2 virus has caused tremendous healthcare burden worldwide. Our focus was to develop a practical and easy-to-deploy system to predict the severe manifestation of disease in patients with COVID-19 with an aim to assist clinicians in triage and treatment decisions. Our proposed predictive...

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Autores principales: Singh, Vivek, Kamaleswaran, Rishikesan, Chalfin, Donald, Buño-Soto, Antonio, San Roman, Janika, Rojas-Kenney, Edith, Molinaro, Ross, von Sengbusch, Sabine, Hodjat, Parsa, Comaniciu, Dorin, Kamen, Ali
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626152/
https://www.ncbi.nlm.nih.gov/pubmed/34870131
http://dx.doi.org/10.1016/j.isci.2021.103523
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author Singh, Vivek
Kamaleswaran, Rishikesan
Chalfin, Donald
Buño-Soto, Antonio
San Roman, Janika
Rojas-Kenney, Edith
Molinaro, Ross
von Sengbusch, Sabine
Hodjat, Parsa
Comaniciu, Dorin
Kamen, Ali
author_facet Singh, Vivek
Kamaleswaran, Rishikesan
Chalfin, Donald
Buño-Soto, Antonio
San Roman, Janika
Rojas-Kenney, Edith
Molinaro, Ross
von Sengbusch, Sabine
Hodjat, Parsa
Comaniciu, Dorin
Kamen, Ali
author_sort Singh, Vivek
collection PubMed
description The SARS-CoV-2 virus has caused tremendous healthcare burden worldwide. Our focus was to develop a practical and easy-to-deploy system to predict the severe manifestation of disease in patients with COVID-19 with an aim to assist clinicians in triage and treatment decisions. Our proposed predictive algorithm is a trained artificial intelligence-based network using 8,427 COVID-19 patient records from four healthcare systems. The model provides a severity risk score along with likelihoods of various clinical outcomes, namely ventilator use and mortality. The trained model using patient age and nine laboratory markers has the prediction accuracy with an area under the curve (AUC) of 0.78, 95% CI: 0.77–0.82, and the negative predictive value NPV of 0.86, 95% CI: 0.84–0.88 for the need to use a ventilator and has an accuracy with AUC of 0.85, 95% CI: 0.84–0.86, and the NPV of 0.94, 95% CI: 0.92–0.96 for predicting in-hospital 30-day mortality.
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spelling pubmed-86261522021-11-29 A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers Singh, Vivek Kamaleswaran, Rishikesan Chalfin, Donald Buño-Soto, Antonio San Roman, Janika Rojas-Kenney, Edith Molinaro, Ross von Sengbusch, Sabine Hodjat, Parsa Comaniciu, Dorin Kamen, Ali iScience Article The SARS-CoV-2 virus has caused tremendous healthcare burden worldwide. Our focus was to develop a practical and easy-to-deploy system to predict the severe manifestation of disease in patients with COVID-19 with an aim to assist clinicians in triage and treatment decisions. Our proposed predictive algorithm is a trained artificial intelligence-based network using 8,427 COVID-19 patient records from four healthcare systems. The model provides a severity risk score along with likelihoods of various clinical outcomes, namely ventilator use and mortality. The trained model using patient age and nine laboratory markers has the prediction accuracy with an area under the curve (AUC) of 0.78, 95% CI: 0.77–0.82, and the negative predictive value NPV of 0.86, 95% CI: 0.84–0.88 for the need to use a ventilator and has an accuracy with AUC of 0.85, 95% CI: 0.84–0.86, and the NPV of 0.94, 95% CI: 0.92–0.96 for predicting in-hospital 30-day mortality. Elsevier 2021-11-27 /pmc/articles/PMC8626152/ /pubmed/34870131 http://dx.doi.org/10.1016/j.isci.2021.103523 Text en © 2021 The Authors https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Singh, Vivek
Kamaleswaran, Rishikesan
Chalfin, Donald
Buño-Soto, Antonio
San Roman, Janika
Rojas-Kenney, Edith
Molinaro, Ross
von Sengbusch, Sabine
Hodjat, Parsa
Comaniciu, Dorin
Kamen, Ali
A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers
title A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers
title_full A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers
title_fullStr A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers
title_full_unstemmed A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers
title_short A deep learning approach for predicting severity of COVID-19 patients using a parsimonious set of laboratory markers
title_sort deep learning approach for predicting severity of covid-19 patients using a parsimonious set of laboratory markers
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626152/
https://www.ncbi.nlm.nih.gov/pubmed/34870131
http://dx.doi.org/10.1016/j.isci.2021.103523
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