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Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches

Eight new oxadiazole derivatives were designed then geometries for ground state were optimized through Density Functional Theory (DFT) at B3LYP/6-31G** level. Single electron transfer mechanism has been studied to understand the antioxidant ability of the oxadiazole derivatives. Then molecular elect...

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Autores principales: Irfan, Ahmad, Imran, Muhammad, Al-Sehemi, Abdullah G., Shah, Asma Tufail, Hussien, Mohamed, Mumtaz, Muhammad Waseem
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626296/
https://www.ncbi.nlm.nih.gov/pubmed/34867045
http://dx.doi.org/10.1016/j.sjbs.2021.08.049
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author Irfan, Ahmad
Imran, Muhammad
Al-Sehemi, Abdullah G.
Shah, Asma Tufail
Hussien, Mohamed
Mumtaz, Muhammad Waseem
author_facet Irfan, Ahmad
Imran, Muhammad
Al-Sehemi, Abdullah G.
Shah, Asma Tufail
Hussien, Mohamed
Mumtaz, Muhammad Waseem
author_sort Irfan, Ahmad
collection PubMed
description Eight new oxadiazole derivatives were designed then geometries for ground state were optimized through Density Functional Theory (DFT) at B3LYP/6-31G** level. Single electron transfer mechanism has been studied to understand the antioxidant ability of the oxadiazole derivatives. Then molecular electrostatic potential and quantitative structure–activity relationship (QSAR) was probed. Additionally, we shed light on different molecular descriptors, e.g., electrophilicity(ω), electronegativity(χ), electrophilicity indices(ωi), hardness(η), softness(S) and chemical potential(μ).The smaller value of ionization potential for 5a is showing that it might be efficient antioxidant candidate. The electrophilic reactive sites in 2a, 3a, 4a, 5a and 7a derivatives might be a good choice for reactivity that would be advantageous to improve the biological activity. The polar surface area of 3a, 4a and 5a derivatives was found < 60 A(2) which is enlightening that these drugs might be suitable as orally active and for brain penetration. First-principles calculations and molecular docking results revealed that 5a would lead to superior antioxidant activity.
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spelling pubmed-86262962021-12-02 Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches Irfan, Ahmad Imran, Muhammad Al-Sehemi, Abdullah G. Shah, Asma Tufail Hussien, Mohamed Mumtaz, Muhammad Waseem Saudi J Biol Sci Original Article Eight new oxadiazole derivatives were designed then geometries for ground state were optimized through Density Functional Theory (DFT) at B3LYP/6-31G** level. Single electron transfer mechanism has been studied to understand the antioxidant ability of the oxadiazole derivatives. Then molecular electrostatic potential and quantitative structure–activity relationship (QSAR) was probed. Additionally, we shed light on different molecular descriptors, e.g., electrophilicity(ω), electronegativity(χ), electrophilicity indices(ωi), hardness(η), softness(S) and chemical potential(μ).The smaller value of ionization potential for 5a is showing that it might be efficient antioxidant candidate. The electrophilic reactive sites in 2a, 3a, 4a, 5a and 7a derivatives might be a good choice for reactivity that would be advantageous to improve the biological activity. The polar surface area of 3a, 4a and 5a derivatives was found < 60 A(2) which is enlightening that these drugs might be suitable as orally active and for brain penetration. First-principles calculations and molecular docking results revealed that 5a would lead to superior antioxidant activity. Elsevier 2021-12 2021-08-23 /pmc/articles/PMC8626296/ /pubmed/34867045 http://dx.doi.org/10.1016/j.sjbs.2021.08.049 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Irfan, Ahmad
Imran, Muhammad
Al-Sehemi, Abdullah G.
Shah, Asma Tufail
Hussien, Mohamed
Mumtaz, Muhammad Waseem
Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches
title Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches
title_full Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches
title_fullStr Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches
title_full_unstemmed Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches
title_short Exploration of electronic properties, radical scavenging activity and QSAR of oxadiazole derivatives by molecular docking and first-principles approaches
title_sort exploration of electronic properties, radical scavenging activity and qsar of oxadiazole derivatives by molecular docking and first-principles approaches
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8626296/
https://www.ncbi.nlm.nih.gov/pubmed/34867045
http://dx.doi.org/10.1016/j.sjbs.2021.08.049
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